RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 NSMAFQ92636 917 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 PYURFQ96I23 114 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 NSL1Q96IY1 281 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 SORCS2Q96PQ0 1159 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 BDH2Q9BUT1 245 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 PLK3Q9H4B4 646 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 FAIMQ9NVQ4 179 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 MYEF2Q9P2K5 600 aaKnown RBP6.9□□□□□ -1.3
RFC1-207ENST00000504554 IL20RAQ9UHF4 553 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 RPS6KA6Q9UK32 745 aa6.9□□□□□ -1.3
RFC1-207ENST00000504554 SAMD4AQ9UPU9 718 aaKnown RBP6.9□□□□□ -1.3
RFC1-207ENST00000504554 ARID1AO14497 2285 aa6.9□□□□□ -1.31
RFC1-207ENST00000504554 SH3PXD2BA1X283 911 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CENPBD1B2RD01 187 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 GSC2O15499 205 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 PDE5AO76074 875 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 UBL3O95164 117 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 HEXAP06865 529 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 NR4A1P22736 598 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 SLC9A3P48764 834 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 RIPPLY3P57055 190 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 SNTB2Q13425 540 aaKnown RBP6.89□□□□□ -1.31
RFC1-207ENST00000504554 DAG1Q14118 895 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 EFNB3Q15768 340 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 C21orf62-AS1Q17RA5 79 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 ZBED5Q49AG3 693 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 FGD3Q5JSP0 725 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 UGT2A3Q6UWM9 527 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 C16orf89Q6UX73 402 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 FOXL2NBQ6ZUU3 175 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 SLC16A14Q7RTX9 510 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 ZER1Q7Z7L7 766 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CYP4Z1Q86W10 505 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CCDC36Q8IYA8 594 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 SVOPLQ8N434 492 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CCDC197Q8NCU1 140 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
RFC1-207ENST00000504554 OR4F15Q8NGB8 312 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 RASD2Q96D21 266 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 CLPTM1LQ96KA5 538 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 Q96M85 177 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 NSMCE2Q96MF7 247 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 FOXN4Q96NZ1 517 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 DOK1Q99704 481 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 REG4Q9BYZ8 158 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 MRPL37Q9BZE1 423 aaKnown RBP6.89□□□□□ -1.31
RFC1-207ENST00000504554 ANKRD19PQ9H560 264 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 ZNF442Q9H7R0 627 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 VNN3Q9NY84 501 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 ADAM21Q9UKJ8 722 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 FZR1Q9UM11 496 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 SIGLEC7Q9Y286 467 aa6.89□□□□□ -1.31
RFC1-207ENST00000504554 TEX13CA0A0J9YWL9 993 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SLC22A23A1A5C7 686 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 HTR3EA5X5Y0 456 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 B9A039 149 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 RAB36O95755 333 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SERPINA5P05154 406 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 CD14P08571 375 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 OR8G3PP0DMU2 310 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 PAX7P23759 505 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 APEX1P27695 318 aaKnown RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 RRM2P31350 389 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 IFNA8P32881 189 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 EFNA4P52798 201 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 NUDT6P53370 316 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 ERVS71-1P61550 626 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 MRPS34P82930 218 aaKnown RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 MXRA7P84157 204 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SPIBQ01892 262 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 CD47Q08722 323 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 PPP1R8Q12972 351 aaKnown RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 ENDOGQ14249 297 aaKnown RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 MAD2L1BPQ15013 274 aaPredicted RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 RAB35Q15286 201 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SGCAQ16586 387 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 TMEM255AQ5JRV8 349 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 GKAP1Q5VSY0 366 aaPredicted RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 PTCHD4Q6ZW05 846 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 ZDHHC13Q8IUH4 622 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 ARIH2OSQ8N7S6 290 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 AKR7LQ8NHP1 331 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 RSRC1Q96IZ7 334 aaKnown RBP6.88□□□□□ -1.31
RFC1-207ENST00000504554 KCNS3Q9BQ31 491 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SYT3Q9BQG1 590 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 ALG12Q9BV10 488 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 WNT5BQ9H1J7 359 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SIAEQ9HAT2 523 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 IL1RAPQ9NPH3 570 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 TAS2R1Q9NYW7 299 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 PCDHB10Q9UN67 800 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 ZANQ9Y493 2812 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 PLCE1Q9P212 2302 aa6.88□□□□□ -1.31
RFC1-207ENST00000504554 SETD2Q9BYW2 2564 aaPredicted RBP6.87□□□□□ -1.31
RFC1-207ENST00000504554 FN1P02751 2386 aaKnown RBP6.87□□□□□ -1.31
RFC1-207ENST00000504554 LOC100509620A0A075B734 347 aa6.87□□□□□ -1.31
RFC1-207ENST00000504554 UNC119BA6NIH7 251 aa6.87□□□□□ -1.31
RFC1-207ENST00000504554 INAFM1C9JVW0 142 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms