RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 GP1BBP13224 206 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ZNF28P17035 718 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FCARP24071 287 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 HOXC12P31275 282 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 LSSP48449 732 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 AKR1C2P52895 323 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SERF2P84101 59 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 AGTRAPQ6RW13 159 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 OR4N4Q8N0Y3 316 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 PLEKHF2Q9H8W4 249 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 AMBNQ9NP70 447 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 HSPB7Q9UBY9 170 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 V9GYH0 126 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 MYOCOSA0A1B0GUC4 107 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 M0QYG6 137 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SCO1O75880 301 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SOX10P56693 466 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 MALLQ13021 153 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 CLN3Q13286 438 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 VASNQ6EMK4 673 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FAM71E1Q6IPT2 247 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 MTMR14Q8NCE2 650 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 RCBTB1Q8NDN9 531 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 OR6X1Q8NH79 312 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 LGALS14Q8TCE9 139 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 IGSF8Q969P0 613 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 CELF6Q96J87 481 aaKnown RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 C2orf42Q9NWW7 574 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 GDE1Q9NZC3 331 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ZNF223Q9UK11 482 aaPredicted RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 AMD1P17707 334 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 TACR2P21452 398 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FXYD6P3P58550 94 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ACVR1Q04771 509 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ZNF596Q8TC21 504 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FAM3CQ92520 227 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ATOH8Q96SQ7 321 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 KIR3DX1Q9H7L2 352 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 TRAPPC2LQ9UL33 140 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 KIAA1217Q5T5P2 1943 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ITGB4P16144 1822 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 CD300LBA8K4G0 201 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SOCS7O14512 581 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 CD8AP01732 235 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ASGR2P07307 311 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 HIST1H1BP16401 226 aaKnown RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 DRD5P21918 477 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 HNRNPA2B1P22626 353 aaKnown RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 PTGFRP43088 359 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 VASPP50552 380 aaPredicted RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 CLDN6P56747 220 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SPIN3Q5JUX0 258 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FAM151BQ6UXP7 276 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ZNF687Q8N1G0 1237 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 MS4A6EQ96DS6 147 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SMOC1Q9H4F8 434 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 AK3Q9UIJ7 227 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 Q9Y3F1 56 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 ZNF850A8MQ14 1090 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SOD3P08294 240 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FUT4P22083 530 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 PCBP4P57723 403 aaKnown RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 SRSF5Q13243 272 aaKnown RBP5.6□□□□□ -1.51
LINC02397-201ENST00000504409 FGF14Q92915 247 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 TMEM169Q96HH4 297 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 TMEM19Q96HH6 336 aa5.6□□□□□ -1.51
LINC02397-201ENST00000504409 GEMIN2O14893 280 aaKnown RBP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 OR5G3P0C626 314 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 CCR2P41597 374 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 BPIFB3P59826 476 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 MGAT3Q09327 533 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 GAB1Q13480 694 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 SLBPQ14493 270 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 TECPR1Q7Z6L1 1165 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 HMGCLL1Q8TB92 370 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 LINC01599Q8WXQ3 324 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 KHSRPQ92945 711 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 EMID1Q96A84 441 aaPredicted RBP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 PIK3IP1Q96FE7 263 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 SLC6A18Q96N87 628 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 ASCL3Q9NQ33 180 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 DDX4Q9NQI0 724 aaKnown RBP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 USP36Q9P275 1121 aaKnown RBP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 ABI3Q9P2A4 366 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 FLVCR1Q9Y5Y0 555 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 MEIS3P2A8K0S8 358 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 HOXC13P31276 330 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 SMAD3P84022 425 aaKnown RBP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 KCTD11Q693B1 232 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 SFRP4Q6FHJ7 346 aaPredicted RBP5.59□□□□□ -1.51
LINC02397-201ENST00000504409 CMTM2Q8TAZ6 248 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 SHDQ96IW2 340 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 DDA1Q9BW61 102 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 P4HTMQ9NXG6 502 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 PLEK2Q9NYT0 353 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 FAM227AF5H4B4 570 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 MELTFP08582 738 aa5.59□□□□□ -1.51
LINC02397-201ENST00000504409 EPHA2P29317 976 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms