RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GCDHQ92947 438 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-220ENST00000496711 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 CACNG6Q9BXT2 260 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 SERINC1Q9NRX5 453 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 MED29Q9NX70 200 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 PAQR5Q9NXK6 330 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-220ENST00000496711 SLC22A13Q9Y226 551 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 PHF3Q92576 2039 aaKnown RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 NTN3O00634 580 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 EFNA2O43921 213 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 GDF9O60383 454 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 KHDRBS3O75525 346 aaKnown RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 ZNF28P17035 718 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 CDK2P24941 298 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 HOXD12P35452 270 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 AP3S2P59780 193 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 MYBPHQ13203 477 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 MAB21L1Q13394 359 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 SNTB2Q13425 540 aaKnown RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 PCK2Q16822 640 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 TMEM53Q6P2H8 277 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 NDUFAF7Q7L592 441 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 MDGA2Q7Z553 956 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 LIX1LQ8IVB5 337 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 WDFY1Q8IWB7 410 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 AGBL5Q8NDL9 886 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 ADPRHL1Q8NDY3 354 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 OR2M3Q8NG83 312 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 OR52I2Q8NH67 350 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 FCAMRQ8WWV6 532 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 CMKLR1Q99788 373 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 DHDHQ9UQ10 334 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 RCE1Q9Y256 329 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 TTLL8A6PVC2 850 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 SRSF10O75494 262 aaKnown RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 AQP8O94778 261 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 TPPPO94811 219 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 LDOC1O95751 146 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 C1QBP02746 253 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 KLK3P07288 261 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 CSRP1P21291 193 aaKnown RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 ERP29P30040 261 aaKnown RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 RCVRNP35243 200 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 CCR6P51684 374 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 RAG2P55895 527 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 TAS2R20P59543 309 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 FAM198BQ6UWH4 519 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 BTN2A1Q7KYR7 527 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 ST7LQ8TDW4 575 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 TRAF4Q9BUZ4 470 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 MED28Q9H204 178 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 GHITMQ9H3K2 345 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 NIPAL2Q9H841 368 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 ZNF275Q9NSD4 429 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 RPH3AQ9Y2J0 694 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-220ENST00000496711 R4GMQ9 66 aa11.68□□□□□ -0.54
GARNL3-220ENST00000496711 MYO15AQ9UKN7 3530 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 COL27A1Q8IZC6 1860 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-220ENST00000496711 VCANP13611 3396 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 IGHV1-45A0A0A0MS14 117 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 IGKV1D-43A0A0B4J1Z2 117 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 NAP1L6A6NFF2 107 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 C9J4A7 227 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 H0YC42 278 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 ACOT7O00154 380 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 TP53I11O14683 189 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 RAD1O60671 282 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 HRGP04196 525 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 CD2P06729 351 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 TCEA1P23193 301 aaKnown RBP11.67□□□□□ -0.54
GARNL3-220ENST00000496711 STOMP27105 288 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 BIDP55957 195 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 RPS15P62841 145 aaKnown RBP11.67□□□□□ -0.54
GARNL3-220ENST00000496711 ZXDAP98168 799 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 NDUFA5Q16718 116 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 TRIM61Q5EBN2 209 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 DCXRQ7Z4W1 244 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 LINC00346Q8IVM7 164 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 GLB1L2Q8IW92 636 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 MAML2Q8IZL2 1156 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-220ENST00000496711 ASCC1Q8N9N2 400 aaKnown RBP11.67□□□□□ -0.54
GARNL3-220ENST00000496711 OR4K17Q8NGC6 315 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 MR1Q95460 341 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 ZC3H10Q96K80 434 aaKnown RBP11.67□□□□□ -0.54
GARNL3-220ENST00000496711 OR2M2Q96R28 347 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 KLHL13Q9P2N7 655 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 FBXL2Q9UKC9 423 aa11.67□□□□□ -0.54
GARNL3-220ENST00000496711 H2AFB2P0C5Z0 115 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 FSTP19883 344 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 GZMKP49863 264 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ZFP36L1Q07352 338 aaKnown RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 C19orf57Q0VDD7 668 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 FAPQ12884 760 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 INPP5JQ15735 1006 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 TMEM225Q6GV28 225 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 UEVLDQ8IX04 471 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 FADS6Q8N9I5 356 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 SLC25A43Q8WUT9 341 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 PPP1R14AQ96A00 147 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms