RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 TRIM64BA6NI03 449 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 VSTM5A8MXK1 200 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 SMAD7O15105 426 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 FKBP6O75344 327 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 CRLF1O75462 422 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 SOX14O95416 240 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 RENP00797 406 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 GASTP01350 101 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 DANCRP0C864 163 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 HOXB6P17509 224 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 LAP3P28838 519 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 APOBEC3AP31941 199 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 HMGA2P52926 109 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 FXYD6P3P58550 94 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 GALK2Q01415 458 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 SNTB2Q13425 540 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 DAG1Q14118 895 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ETFDHQ16134 617 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 MICAQ29983 383 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 C3orf36Q3SXR2 165 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF544Q6NX49 715 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 LEG1Q6P5S2 330 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF620Q6ZNG0 422 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 YTHDF3Q7Z739 585 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 DPPA2Q7Z7J5 298 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ADCK1Q86TW2 530 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 IL17RDQ8NFM7 739 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR10G2Q8NGC3 310 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR4K13Q8NH42 304 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 GIPC3Q8TF64 312 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 IGFBPL1Q8WX77 278 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 NMD3Q96D46 503 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 GPX7Q96SL4 187 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 BDH2Q9BUT1 245 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 TRAF4Q9BUZ4 470 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 CACNG6Q9BXT2 260 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 SYT4Q9H2B2 425 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 EGLN3Q9H6Z9 239 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 CA10Q9NS85 328 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 CBLN4Q9NTU7 201 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF224Q9NZL3 707 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 PDP1Q9P0J1 537 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 POLR1DQ9Y2S0 133 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 SPEF1Q9Y4P9 236 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 UGT2A1Q9Y4X1 527 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 CDH10Q9Y6N8 788 aa9.02□□□□□ -0.97
TRAPPC12-222ENST00000493792 SONP18583 2426 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 TCRBV3S1A0A5B6 114 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 C12orf71A8MTZ7 269 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 EBAG9O00559 213 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 IMPA2O14732 288 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 AHCYL1O43865 530 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 TMCC2O75069 709 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 KHDRBS3O75525 346 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 TIPRLO75663 272 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 PTHP01270 115 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 SERPINA5P05154 406 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR4A8P0C604 315 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 BMP4P12644 408 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 CCL2P13500 99 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 PAX1P15863 534 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 HIST1H1CP16403 213 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF32P17041 273 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 GSTM3P21266 225 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 MSR1P21757 451 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 CCNOP22674 350 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 APEX1P27695 318 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 APLNRP35414 380 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 CDKN2AP42771 156 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF133P52736 654 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 PPP2R2BQ00005 443 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 HGFACQ04756 655 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 TBC1D28Q2M2D7 210 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 NRN1LQ496H8 165 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 PABPC1L2AQ5JQF8 200 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 RPL13AP3Q6NVV1 102 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 DNM1P34Q6PK57 102 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 PTCHD4Q6ZW05 846 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 DTX2Q86UW9 622 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 ICA1LQ8NDH6 482 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 SLC30A7Q8NEW0 376 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 SDR9C7Q8NEX9 313 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR52E2Q8NGJ4 325 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 NABP1Q96AH0 204 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 TSSK2Q96PF2 358 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 NMNAT3Q96T66 252 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 TSSK6Q9BXA6 273 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 GSX2Q9BZM3 304 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 LRMDAQ9H2I8 198 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 OR51B6Q9H340 312 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 MMADHCQ9H3L0 296 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 ZNF556Q9HAH1 456 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 SRA1Q9HD15 236 aaKnown RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 EMC7Q9NPA0 242 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 COA3Q9Y2R0 106 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 PMF1-BGLAPU3KQ54 211 aa9.01□□□□□ -0.97
TRAPPC12-222ENST00000493792 H3BN98 237 aa9□□□□□ -0.97
TRAPPC12-222ENST00000493792 ARPC3O15145 178 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms