RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C1orf229Q6ZS94 237 aaPredicted RBP7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 CBLL1Q75N03 491 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 ARPINQ7Z6K5 226 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 VTCN1Q7Z7D3 282 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 NRMQ8IXM6 262 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 LRRC18Q8N456 261 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 ZFAND2BQ8WV99 257 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 ACOT11Q8WXI4 607 aaPredicted RBP7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 TMEM186Q96B77 213 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 HOPXQ9BPY8 73 aaPredicted RBP7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 OR2H1Q9GZK4 316 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 ANKRD19PQ9H560 264 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 RNF121Q9H920 327 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 CDH20Q9HBT6 801 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 G6PC2Q9NQR9 355 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 TUBG2Q9NRH3 451 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 TIMM10BQ9Y5J6 103 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 CAPN7Q9Y6W3 813 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 DYSFO75923 2080 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 DOCK11Q5JSL3 2073 aa7.13□□□□□ -1.27
SMARCB1-207ENST00000491967 A0A087WUU8 490 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 A0A1W2PPW3 197 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 A6NIZ1 184 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 NME4O00746 187 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CDC42EP2O14613 210 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 IGHV1-46P01743 117 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 SCG5P05408 212 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CD55P08174 381 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 COX5BP10606 129 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 IFI30P13284 250 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 LAP3P28838 519 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 APLNRP35414 380 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 LIPAP38571 399 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CTXN1P60606 82 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 RAP1BP61224 184 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 RAP1AP62834 184 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CCL8P80075 99 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 GUCY1A3Q02108 690 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 TEKQ02763 1124 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CCNIQ14094 377 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 TRAM2Q15035 370 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 NKPD1Q17RQ9 610 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 LIPNQ5VXI9 398 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 TMEM154Q6P9G4 183 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 MBOAT2Q6ZWT7 520 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 FAM122BQ7Z309 247 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 GLCCI1Q86VQ1 547 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CLDN22Q8N7P3 220 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 KLF14Q8TD94 323 aaPredicted RBP7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 GEMIN6Q8WXD5 167 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 LZICQ8WZA0 190 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 RCN3Q96D15 328 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 TPD52L3Q96J77 140 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 RBP7Q96R05 134 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 GPX7Q96SL4 187 aaPredicted RBP7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 FUZQ9BT04 418 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 HIF1ANQ9NWT6 349 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 TREM2Q9NZC2 230 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 ARMCX1Q9P291 453 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 GMPR2Q9P2T1 348 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 ABCD2Q9UBJ2 740 aa7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 CGGBP1Q9UFW8 167 aaPredicted RBP7.12□□□□□ -1.27
SMARCB1-207ENST00000491967 IGHV1-69-2A0A0G2JMI3 117 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 A0A1W2PRQ8 180 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 C5orf49A4QMS7 147 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 J3KTA2 159 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 CXCR6O00574 342 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 PPIHO43447 177 aaKnown RBP7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 TCF21O43680 179 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 UBOX5O94941 541 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 NGFP01138 241 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 AVPP01185 164 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 IFNW1P05000 195 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 LCKP06239 509 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 CD14P08571 375 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 COX4I1P13073 169 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 ANPEPP15144 967 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 MPV17P39210 176 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 LIMS1P48059 325 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 GSK3BP49841 420 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 GDI2P50395 445 aaKnown RBP7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 PCBD1P61457 104 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 SRSF2Q01130 221 aaKnown RBP7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 HSF2Q03933 536 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 LIPEQ05469 1076 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 CDK5R2Q13319 367 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 DGCR6Q14129 220 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 SGCAQ16586 387 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 ZNF718Q3SXZ3 478 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 ZBED5Q49AG3 693 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 LRRC23Q53EV4 343 aaPredicted RBP7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 IFI44LQ53G44 452 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 TBPL2Q6SJ96 375 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 UNQ6126/PRO20091Q6UXV3 157 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 USP43Q70EL4 1123 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 OAFQ86UD1 273 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 MEX3DQ86XN8 651 aaKnown RBP7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 ALDH16A1Q8IZ83 802 aa7.11□□□□□ -1.27
SMARCB1-207ENST00000491967 SEMA6DQ8NFY4 1073 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms