RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 OR4C15Q8NGM1 316 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 C10orf105Q8TEF2 133 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 MRPL24Q96A35 216 aaKnown RBP15.59■□□□□ 0.09
COL9A3-214ENST00000490398 CCDC124Q96CT7 223 aaKnown RBP15.59■□□□□ 0.09
COL9A3-214ENST00000490398 RHNO1Q9BSD3 238 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 ZNF416Q9BWM5 594 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 POLE4Q9NR33 117 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 FBXL3Q9UKT7 428 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 LYVE1Q9Y5Y7 322 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 ACOT8O14734 319 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 MPZL1O95297 269 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 GPANK1O95872 356 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 CLPTM1O96005 669 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 ADRA2AP08913 450 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 FPR3P25089 353 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 SDHAP31040 664 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 WNT5AP41221 380 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 GSSP48637 474 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 PPOXP50336 477 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 SMIM11AP58511 58 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 GALK2Q01415 458 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 RFX4Q33E94 735 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 SMARCD3Q6STE5 483 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 CLEC2AQ6UVW9 174 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 DPY19L2P2Q6ZN68 376 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 DHFR2Q86XF0 187 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 ARHGAP24Q8N264 748 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 FANK1Q8TC84 345 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 POM121Q96HA1 1249 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 SAMD8Q96LT4 415 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 TSSK2Q96PF2 358 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 BTBD10Q9BSF8 475 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 THTPAQ9BU02 230 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 SYT4Q9H2B2 425 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 OR52D1Q9H346 318 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 TPK1Q9H3S4 243 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 CCNB1IP1Q9NPC3 277 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 SLC7A8Q9UHI5 535 aa15.58■□□□□ 0.08
COL9A3-214ENST00000490398 PRPF19Q9UMS4 504 aaKnown RBP15.58■□□□□ 0.08
COL9A3-214ENST00000490398 CR1P17927 2039 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 DCTN6O00399 190 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 ENTPD5O75356 428 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 TXNDC12O95881 172 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 CST2P09228 141 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 ALDH3B1P43353 468 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 HMGA2P52926 109 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 HSF2Q03933 536 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 ZNF770Q6IQ21 691 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-214ENST00000490398 ZNF774Q6NX45 483 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 C1orf94Q6P1W5 598 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 DPPA2Q7Z7J5 298 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 SLC7A6OSQ96CW6 309 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-214ENST00000490398 POM121L2Q96KW2 1035 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 OR2H1Q9GZK4 316 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 NUAK2Q9H093 628 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 C1orf21Q9H246 121 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 RERGLQ9H628 205 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 EGLN3Q9H6Z9 239 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 CDH20Q9HBT6 801 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 VSX1Q9NZR4 365 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-214ENST00000490398 TMCC3Q9ULS5 477 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 COA3Q9Y2R0 106 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-214ENST00000490398 NAV3Q8IVL0 2385 aa15.57■□□□□ 0.08
COL9A3-214ENST00000490398 RTTNQ86VV8 2226 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 IQCMA0A1B0GVH7 501 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 INAFM1C9JVW0 142 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 LYNX1G3V0Z9 82 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 TNFRSF11BO00300 401 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 XKRYO14609 159 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 SLC16A7O60669 478 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 SNAP29O95721 258 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 LYNX1P0DP58 116 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 NR2C1P13056 603 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 MSR1P21757 451 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 CCNOP22674 350 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 STOMP27105 288 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 PLP2Q04941 152 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 TBC1D28Q2M2D7 210 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 ALKBH6Q3KRA9 238 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 MTX3Q5HYI7 312 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 TMEM255AQ5JRV8 349 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 GPR139Q6DWJ6 353 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 ZNF101Q8IZC7 436 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 FNDC8Q8TC99 324 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 FAM168AQ92567 244 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 ERMAPQ96PL5 475 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-214ENST00000490398 KCNN2Q9H2S1 579 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 DUSP13Q9UII6 198 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 SPEF1Q9Y4P9 236 aa15.56■□□□□ 0.08
COL9A3-214ENST00000490398 FAM171A2A8MVW0 826 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 VSTM5A8MXK1 200 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 VWC2LB2RUY7 222 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 GASTP01350 101 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 PCSK6P29122 969 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 APLNRP35414 380 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 UCP2P55851 309 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 TSPAN31Q12999 210 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 CARTPTQ16568 116 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 PGM2L1Q6PCE3 622 aa15.55■□□□□ 0.08
COL9A3-214ENST00000490398 ZNF620Q6ZNG0 422 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms