RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 MAS1LP35410 378 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 CEACAM6P40199 344 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 CSNK1A1P48729 337 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 CDH6P55285 790 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 RAP1AP62834 184 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 ADARB1P78563 741 aaKnown RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 LRRC74AQ0VAA2 488 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 CCDC183Q5T5S1 534 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 MMAAQ8IVH4 418 aaKnown RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 OR7G2Q8NG99 324 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 OR10J6PQ8NGY7 276 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 UBALD1Q8TB05 177 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 RAB3IL1Q8TBN0 382 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 CNDP1Q96KN2 507 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 ZNF578Q96N58 590 aaPredicted RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 SLC29A1Q99808 456 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 SLC25A2Q9BXI2 301 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 SAMSN1Q9NSI8 373 aaKnown RBP2.33□□□□□ -2.04
CD46-216ENST00000490278 ZNF222Q9UK12 451 aa2.33□□□□□ -2.04
CD46-216ENST00000490278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.33□□□□□ -2.04
CD46-216ENST00000490278 SMCO3A2RU48 225 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 CCDC169A6NNP5 214 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 AIM2O14862 343 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 CLOCKO15516 846 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 B4GALT5O43286 388 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 RNF13O43567 381 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 CCNB1P14635 433 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 PRMT2P55345 433 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 ARG2P78540 354 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 SLC25A11Q02978 314 aaKnown RBP2.32□□□□□ -2.04
CD46-216ENST00000490278 MXD1Q05195 221 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 MAB21L1Q13394 359 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 PTPN20Q4JDL3 420 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 THEM4Q5T1C6 240 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 ARMC12Q5T9G4 340 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 RAET1LQ5VY80 246 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 NANOGP8Q6NSW7 305 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 CERS6Q6ZMG9 384 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 Q6ZR03 302 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 BIVMQ86UB2 503 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 ZNF695Q8IW36 515 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 NOXO1Q8NFA2 376 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 ACMSDQ8TDX5 336 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 ELMO1Q92556 727 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 TM4SF18Q96CE8 201 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 CCDC77Q9BR77 488 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 OR51M1Q9H341 326 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 ZNF430Q9H8G1 570 aaPredicted RBP2.32□□□□□ -2.04
CD46-216ENST00000490278 NMRK1Q9NWW6 199 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 UVRAGQ9P2Y5 699 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 UXTQ9UBK9 157 aaPredicted RBP2.32□□□□□ -2.04
CD46-216ENST00000490278 ST3GAL6Q9Y274 331 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 TMED5Q9Y3A6 229 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 RRP15Q9Y3B9 282 aaKnown RBP2.32□□□□□ -2.04
CD46-216ENST00000490278 YTHDF2Q9Y5A9 579 aaKnown RBP2.32□□□□□ -2.04
CD46-216ENST00000490278 MAPK8IP3Q9UPT6 1336 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 TET2Q6N021 2002 aaPredicted RBP2.32□□□□□ -2.04
CD46-216ENST00000490278 MYO10Q9HD67 2058 aa2.32□□□□□ -2.04
CD46-216ENST00000490278 IGHV5-10-1A0A0J9YXX1 117 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 C9JVG2 144 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 AP3B1O00203 1094 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 OR2J3O76001 311 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 SERPINA5P05154 406 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 BCHEP06276 602 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 MRPL3P09001 348 aaKnown RBP2.31□□□□□ -2.04
CD46-216ENST00000490278 CISD3P0C7P0 127 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 IGHV1-8P0DP01 117 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 PSMC3P17980 439 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 RAB3BP20337 219 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 F2RP25116 425 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 GDI1P31150 447 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 ZNF138P52744 262 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 C9orf135Q5VTT2 229 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 DNAJC24Q6P3W2 148 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 ARL9Q6T311 187 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 ABHD12BQ7Z5M8 362 aaPredicted RBP2.31□□□□□ -2.04
CD46-216ENST00000490278 TTC5Q8N0Z6 440 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 OR5B3Q8NH48 314 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 RNF139Q8WU17 664 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 ABHD3Q8WU67 409 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 SLC38A4Q969I6 547 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 PDXPQ96GD0 296 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 FAM49BQ9NUQ9 324 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 RABL2BQ9UNT1 228 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 AKNAQ7Z591 1439 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 SLIT3O75094 1523 aa2.31□□□□□ -2.04
CD46-216ENST00000490278 IGLV1-50A0A075B6I6 118 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 SMCO2A6NFE2 343 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 BET1O15155 118 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 RHOXF2BP0C7M4 288 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 OR5H8P0DN80 308 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 RRM2P31350 389 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 KRTAP10-8P60410 259 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 ESRRGP62508 458 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 SRSF5Q13243 272 aaKnown RBP2.3□□□□□ -2.04
CD46-216ENST00000490278 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
CD46-216ENST00000490278 PRSS58Q8IYP2 241 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms