RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 JMJD8Q96S16 334 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 RIMS3Q9UJD0 308 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 TRRAPQ9Y4A5 3859 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 LOC100509620A0A075B734 347 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 PLSCR5A0PG75 271 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 GMNCA6NCL1 334 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 TRIM77I1YAP6 450 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 J3QLI3 93 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 FXYD1O00168 92 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 FBP2O00757 339 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 ERVK-25P63136 954 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 TOP3AQ13472 1001 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-231ENST00000488905 PIN1Q13526 163 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-231ENST00000488905 RABL3Q5HYI8 236 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 THEM4Q5T1C6 240 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 DCAF12L2Q5VW00 463 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 MBNL2Q5VZF2 373 aaKnown RBP15.64■□□□□ 0.09
HDAC6-231ENST00000488905 UNQ6126/PRO20091Q6UXV3 157 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 AKR7LQ8NHP1 331 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 NSMAFQ92636 917 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 ZMYND19Q96E35 227 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-231ENST00000488905 GAL3ST1Q99999 423 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 SIKE1Q9BRV8 207 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 RBM4Q9BWF3 364 aaKnown RBP15.64■□□□□ 0.09
HDAC6-231ENST00000488905 SUCNR1Q9BXA5 334 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 TXNIPQ9H3M7 391 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 EIF3KQ9UBQ5 218 aaKnown RBP15.64■□□□□ 0.09
HDAC6-231ENST00000488905 MED31Q9Y3C7 131 aa15.64■□□□□ 0.09
HDAC6-231ENST00000488905 A0A0G2JND7 137 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 TMEM89A2RUT3 159 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 ZSCAN5BA6NJL1 495 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 SPRY3O43610 288 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 PIP5K1CO60331 668 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 THRBP10828 461 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 ADRA2CP18825 462 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 GDI2P50395 445 aaKnown RBP15.63■□□□□ 0.09
HDAC6-231ENST00000488905 PSG4Q00888 419 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 CYLC2Q14093 348 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-231ENST00000488905 SGCAQ16586 387 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 ALG10Q5BKT4 473 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 OR8J3Q8NGG0 315 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 SLC25A40Q8TBP6 338 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 KLF14Q8TD94 323 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-231ENST00000488905 CCL17Q92583 94 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 GCDHQ92947 438 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-231ENST00000488905 SLC6A7Q99884 636 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 SH3GL1Q99961 368 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 ECSITQ9BQ95 431 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 ALG12Q9BV10 488 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 OR2J1Q9GZK6 312 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 CGGBP1Q9UFW8 167 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-231ENST00000488905 HIF3AQ9Y2N7 669 aa15.63■□□□□ 0.09
HDAC6-231ENST00000488905 PKD1L1Q8TDX9 2849 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 ISPDA4D126 451 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 H3BSA7 217 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 ICMTO60725 284 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 EDF1O60869 148 aaKnown RBP15.62■□□□□ 0.09
HDAC6-231ENST00000488905 UBOX5O94941 541 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 ADH4P08319 380 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 GATA3P23771 443 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 OR1E2P47887 323 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 LIMS1P48059 325 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 LAPTM4AQ15012 233 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 TAF11Q15544 211 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 FAM27BQ5VT28 67 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 SLC25A47Q6Q0C1 308 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 C1orf174Q8IYL3 243 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 ABHD4Q8TB40 342 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 NANPQ8TBE9 248 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 LRRC58Q96CX6 371 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 OR2H1Q9GZK4 316 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 EGLN1Q9GZT9 426 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 WNT5BQ9H1J7 359 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 CYSLTR2Q9NS75 346 aa15.62■□□□□ 0.09
HDAC6-231ENST00000488905 HMGB1P1B2RPK0 211 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-231ENST00000488905 IFNA14P01570 189 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 IGHMP01871 453 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 CST2P09228 141 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 LAP3P28838 519 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 PPP1CBP62140 327 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 SLC3A1Q07837 685 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 METTL21CQ5VZV1 264 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 ERICH5Q6P6B1 374 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 ZNF771Q7L3S4 317 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-231ENST00000488905 BPIFB2Q8N4F0 458 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 CLDN22Q8N7P3 220 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 C3orf56Q8N813 242 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 GEMIN6Q8WXD5 167 aaKnown RBP15.61■□□□□ 0.09
HDAC6-231ENST00000488905 MEGF8Q7Z7M0 2845 aa15.61■□□□□ 0.09
HDAC6-231ENST00000488905 SPRY1O43609 319 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-231ENST00000488905 FSHBP01225 129 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 LIPAP38571 399 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 RPL27P61353 136 aaKnown RBP15.6■□□□□ 0.09
HDAC6-231ENST00000488905 LCN2P80188 198 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 LRRC23Q53EV4 343 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-231ENST00000488905 CYBRD1Q53TN4 286 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 ZMAT1Q5H9K5 638 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 COQ5Q5HYK3 327 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 FAM205BPQ63HN1 556 aa15.6■□□□□ 0.09
HDAC6-231ENST00000488905 FOXL2NBQ6ZUU3 175 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms