RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PLP1P60201 277 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 ACTG2P63267 376 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 ECH1Q13011 328 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 PRPSAP1Q14558 356 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 TGFBIQ15582 683 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 CEMP1Q6PRD7 247 aaPredicted RBP1.62□□□□□ -2.15
CCDC66-221ENST00000487739 DUX4L9Q6RFH8 374 aaPredicted RBP1.62□□□□□ -2.15
CCDC66-221ENST00000487739 NIPA1Q7RTP0 329 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 RIMKLAQ8IXN7 391 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 OR1S2Q8NGQ3 325 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 OR4S2Q8NH73 311 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 ZCCHC13Q8WW36 166 aaKnown RBP1.62□□□□□ -2.15
CCDC66-221ENST00000487739 NT5C3BQ969T7 300 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 TUBGCP3Q96CW5 907 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 PDXPQ96GD0 296 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 FOXC2Q99958 501 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 SH3GL3Q99963 347 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 LINC00597Q9H2U6 94 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 RPP21Q9H633 154 aaKnown RBP1.62□□□□□ -2.15
CCDC66-221ENST00000487739 C12orf10Q9HB07 376 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 KCNJ16Q9NPI9 418 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 KLHL28Q9NXS3 571 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 IKZF2Q9UKS7 526 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 MMACHCQ9Y4U1 282 aa1.62□□□□□ -2.15
CCDC66-221ENST00000487739 TRAV39A0A0B4J263 110 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 A0A0B4J2A0 478 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 SERPIND1P05546 499 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 BCHEP06276 602 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 IFNA8P32881 189 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 CSNK1A1P48729 337 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 YWHAGP61981 247 aaKnown RBP eCLIP1.61□□□□□ -2.15
CCDC66-221ENST00000487739 RPL23AP62750 156 aaKnown RBP1.61□□□□□ -2.15
CCDC66-221ENST00000487739 SYCNQ0VAF6 134 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 BST2Q10589 180 aaKnown RBP1.61□□□□□ -2.15
CCDC66-221ENST00000487739 ERCC8Q13216 396 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 MAB21L1Q13394 359 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 GINS1Q14691 196 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 RGNQ15493 299 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 PTPN20Q4JDL3 420 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 PRAMEF5Q5TYX0 476 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 PRAMEF6Q5VXH4 476 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 KDELC1Q6UW63 502 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 TEX43Q6ZNM6 134 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 ABHD13Q7L211 337 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 BIVMQ86UB2 503 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 OAFQ86UD1 273 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 UBE2J2Q8N2K1 259 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 MS4A15Q8N5U1 240 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 EID2Q8N6I1 236 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 ZFP41Q8N8Y5 198 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 FBXO32Q969P5 355 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 NEURL3Q96EH8 262 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 PIK3IP1Q96FE7 263 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 NT5C3AQ9H0P0 336 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 ZNF355PQ9NSJ1 428 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 PISDQ9UG56 409 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 SHPKQ9UHJ6 478 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 ASB3Q9Y575 518 aa1.61□□□□□ -2.15
CCDC66-221ENST00000487739 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
CCDC66-221ENST00000487739 TSPOAP1O95153 1857 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 KANK1Q14678 1352 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 IGLV1-50A0A075B6I6 118 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 IGHV3-74A0A0B4J1X5 117 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 IGHV5-10-1A0A0J9YXX1 117 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ZNF816-ZNF321PA0A0X1KG74 233 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 FAM240BA0A1B0GVZ2 78 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 DPM1O60762 260 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 SRP72O76094 671 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 CST1P01037 141 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 NCF2P19878 526 aaPredicted RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 CRYBB2P43320 205 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ZNF138P52744 262 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ESRRGP62508 458 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 MRPS22P82650 360 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 DDX39BQ13838 428 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 SNRNP35Q16560 246 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ZNF684Q5T5D7 378 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ANKRD26P1Q6NSI1 321 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 NTM-AS1Q6ZSK4 140 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 RUFY3Q7L099 469 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 PEX26Q7Z412 305 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 HDDC2Q7Z4H3 204 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 TMEM135Q86UB9 458 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 PDIK1LQ8N165 341 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 OR13C2Q8NGS9 318 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 OR10R2Q8NGX6 335 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 RHEBL1Q8TAI7 183 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 CXorf40AQ8TE69 158 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ESR2Q92731 530 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 CREB3L1Q96BA8 519 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 SLC25A2Q9BXI2 301 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 METTL7AQ9H8H3 244 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ISYNA1Q9NPH2 558 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 EXTL2Q9UBQ6 330 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 LSM7Q9UK45 103 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ING4Q9UNL4 249 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 ST3GAL6Q9Y274 331 aa1.6□□□□□ -2.15
CCDC66-221ENST00000487739 CSDC2Q9Y534 153 aaKnown RBP1.6□□□□□ -2.15
CCDC66-221ENST00000487739 TNS2Q63HR2 1409 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms