RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PDLIM4P50479 330 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 LSM6P62312 80 aaKnown RBP8.84□□□□□ -0.99
RNF220-215ENST00000487332 ERVK-25P63136 954 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 HSF2Q03933 536 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 KRTAP1-1Q07627 177 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 TRAP1Q12931 704 aaKnown RBP8.84□□□□□ -0.99
RNF220-215ENST00000487332 ENDOGQ14249 297 aaKnown RBP8.84□□□□□ -0.99
RNF220-215ENST00000487332 RFX4Q33E94 735 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 DNM1P34Q6PK57 102 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 VHLLQ6RSH7 139 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 ZNF620Q6ZNG0 422 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 RINLQ6ZS11 566 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 MEX3DQ86XN8 651 aaKnown RBP8.84□□□□□ -0.99
RNF220-215ENST00000487332 AQP12AQ8IXF9 295 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 SVOPLQ8N434 492 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 ZNF525Q8N782 197 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 CLDN22Q8N7P3 220 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 OR4C15Q8NGM1 316 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 GNPDA2Q8TDQ7 276 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 FAM168AQ92567 244 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 NSMAFQ92636 917 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 POM121L2Q96KW2 1035 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 GPA33Q99795 319 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 MRPL37Q9BZE1 423 aaKnown RBP8.84□□□□□ -0.99
RNF220-215ENST00000487332 RACGAP1Q9H0H5 632 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 OR52D1Q9H346 318 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 MS4A5Q9H3V2 200 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 CDH20Q9HBT6 801 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 NDRG4Q9ULP0 352 aaKnown RBP8.84□□□□□ -0.99
RNF220-215ENST00000487332 TMCC3Q9ULS5 477 aa8.84□□□□□ -0.99
RNF220-215ENST00000487332 ABCA4P78363 2273 aa8.83□□□□□ -1
RNF220-215ENST00000487332 LOC390937A0A1W2PQ73 354 aa8.83□□□□□ -1
RNF220-215ENST00000487332 ARRDC5A6NEK1 342 aa8.83□□□□□ -1
RNF220-215ENST00000487332 C12orf71A8MTZ7 269 aa8.83□□□□□ -1
RNF220-215ENST00000487332 RNF223E7ERA6 249 aa8.83□□□□□ -1
RNF220-215ENST00000487332 J3QW42 95 aa8.83□□□□□ -1
RNF220-215ENST00000487332 TLX2O43763 284 aaPredicted RBP8.83□□□□□ -1
RNF220-215ENST00000487332 KHDRBS3O75525 346 aaKnown RBP8.83□□□□□ -1
RNF220-215ENST00000487332 STAMBPO95630 424 aa8.83□□□□□ -1
RNF220-215ENST00000487332 IGFBP1P08833 259 aaPredicted RBP8.83□□□□□ -1
RNF220-215ENST00000487332 HOXB4P17483 251 aaPredicted RBP8.83□□□□□ -1
RNF220-215ENST00000487332 TUBG1P23258 451 aa8.83□□□□□ -1
RNF220-215ENST00000487332 STOMP27105 288 aa8.83□□□□□ -1
RNF220-215ENST00000487332 LAP3P28838 519 aa8.83□□□□□ -1
RNF220-215ENST00000487332 CRABP1P29762 137 aa8.83□□□□□ -1
RNF220-215ENST00000487332 CDAP32320 146 aa8.83□□□□□ -1
RNF220-215ENST00000487332 RAD52P43351 418 aa8.83□□□□□ -1
RNF220-215ENST00000487332 UCP2P55851 309 aa8.83□□□□□ -1
RNF220-215ENST00000487332 MRPS11P82912 194 aaKnown RBP8.83□□□□□ -1
RNF220-215ENST00000487332 SCRN3Q0VDG4 424 aa8.83□□□□□ -1
RNF220-215ENST00000487332 AQP6Q13520 282 aa8.83□□□□□ -1
RNF220-215ENST00000487332 KCNMB1Q16558 191 aa8.83□□□□□ -1
RNF220-215ENST00000487332 MSMPQ1L6U9 139 aa8.83□□□□□ -1
RNF220-215ENST00000487332 FAM98BQ52LJ0 330 aaKnown RBP8.83□□□□□ -1
RNF220-215ENST00000487332 PABPC1L2AQ5JQF8 200 aa8.83□□□□□ -1
RNF220-215ENST00000487332 RGS7BPQ6MZT1 257 aaPredicted RBP8.83□□□□□ -1
RNF220-215ENST00000487332 PGBD2Q6P3X8 592 aa8.83□□□□□ -1
RNF220-215ENST00000487332 CYP2R1Q6VVX0 501 aa8.83□□□□□ -1
RNF220-215ENST00000487332 ALDH16A1Q8IZ83 802 aa8.83□□□□□ -1
RNF220-215ENST00000487332 LRRC18Q8N456 261 aa8.83□□□□□ -1
RNF220-215ENST00000487332 ZNF540Q8NDQ6 660 aa8.83□□□□□ -1
RNF220-215ENST00000487332 OR52J3Q8NH60 311 aa8.83□□□□□ -1
RNF220-215ENST00000487332 IPCEF1Q8WWN9 437 aaPredicted RBP8.83□□□□□ -1
RNF220-215ENST00000487332 RASD2Q96D21 266 aa8.83□□□□□ -1
RNF220-215ENST00000487332 POM121Q96HA1 1249 aa8.83□□□□□ -1
RNF220-215ENST00000487332 SMR3AQ99954 134 aa8.83□□□□□ -1
RNF220-215ENST00000487332 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
RNF220-215ENST00000487332 OR2H1Q9GZK4 316 aa8.83□□□□□ -1
RNF220-215ENST00000487332 WNT5BQ9H1J7 359 aa8.83□□□□□ -1
RNF220-215ENST00000487332 SYT4Q9H2B2 425 aa8.83□□□□□ -1
RNF220-215ENST00000487332 DYNLRB1Q9NP97 96 aa8.83□□□□□ -1
RNF220-215ENST00000487332 TUBG2Q9NRH3 451 aa8.83□□□□□ -1
RNF220-215ENST00000487332 CGGBP1Q9UFW8 167 aaPredicted RBP8.83□□□□□ -1
RNF220-215ENST00000487332 TIMM10BQ9Y5J6 103 aa8.83□□□□□ -1
RNF220-215ENST00000487332 CDH10Q9Y6N8 788 aa8.83□□□□□ -1
RNF220-215ENST00000487332 SPG11Q96JI7 2443 aa8.82□□□□□ -1
RNF220-215ENST00000487332 A0A1W2PPL8 197 aa8.82□□□□□ -1
RNF220-215ENST00000487332 H7C1C5 153 aa8.82□□□□□ -1
RNF220-215ENST00000487332 TNFRSF11BO00300 401 aa8.82□□□□□ -1
RNF220-215ENST00000487332 ACOT8O14734 319 aa8.82□□□□□ -1
RNF220-215ENST00000487332 SMAD7O15105 426 aaKnown RBP8.82□□□□□ -1
RNF220-215ENST00000487332 CD5LO43866 347 aa8.82□□□□□ -1
RNF220-215ENST00000487332 RAP2AP10114 183 aa8.82□□□□□ -1
RNF220-215ENST00000487332 GAAP10253 952 aa8.82□□□□□ -1
RNF220-215ENST00000487332 CTLA4P16410 223 aa8.82□□□□□ -1
RNF220-215ENST00000487332 GIFP27352 417 aa8.82□□□□□ -1
RNF220-215ENST00000487332 APEX1P27695 318 aaKnown RBP8.82□□□□□ -1
RNF220-215ENST00000487332 GDI2P50395 445 aaKnown RBP8.82□□□□□ -1
RNF220-215ENST00000487332 KLF3P57682 345 aaPredicted RBP8.82□□□□□ -1
RNF220-215ENST00000487332 SELENOVP59797 346 aa8.82□□□□□ -1
RNF220-215ENST00000487332 LCN6P62502 163 aa8.82□□□□□ -1
RNF220-215ENST00000487332 PSG4Q00888 419 aa8.82□□□□□ -1
RNF220-215ENST00000487332 MS4A2Q01362 244 aa8.82□□□□□ -1
RNF220-215ENST00000487332 SGCAQ16586 387 aa8.82□□□□□ -1
RNF220-215ENST00000487332 MOGQ16653 247 aa8.82□□□□□ -1
RNF220-215ENST00000487332 FAM209AQ5JX71 171 aa8.82□□□□□ -1
RNF220-215ENST00000487332 MBNL2Q5VZF2 373 aaKnown RBP8.82□□□□□ -1
RNF220-215ENST00000487332 OR2T5Q6IEZ7 315 aa8.82□□□□□ -1
RNF220-215ENST00000487332 ZNF770Q6IQ21 691 aaPredicted RBP8.82□□□□□ -1
RNF220-215ENST00000487332 RASSF6Q6ZTQ3 369 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms