RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PHYHD1Q5SRE7 291 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 HS3ST5Q8IZT8 346 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CBR4Q8N4T8 237 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 WDR31Q8NA23 367 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 NPEPL1Q8NDH3 523 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF555Q8NEP9 628 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 OR4F15Q8NGB8 312 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 OR2AJ1Q8NGZ0 328 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 TRUB1Q8WWH5 349 aaKnown RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 RFKQ969G6 155 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 PIK3IP1Q96FE7 263 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 PLPPR2Q96GM1 343 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 NMNAT3Q96T66 252 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 MYCBPQ99417 103 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CIB1Q99828 191 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 NUAK2Q9H093 628 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 SLC25A19Q9HC21 320 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 RPRD1BQ9NQG5 326 aaKnown RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 RASSF1Q9NS23 344 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 FAIMQ9NVQ4 179 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 IMPAD1Q9NX62 359 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 TVP23BQ9NYZ1 205 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 USE1Q9NZ43 259 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 EIF3KQ9UBQ5 218 aaKnown RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 REV1Q9UBZ9 1251 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 FBXO9Q9UK97 447 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 POU2F3Q9UKI9 436 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 B9D1Q9UPM9 204 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 RNF115Q9Y4L5 304 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 PDZD2O15018 2839 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 OR6C68A6NDL8 312 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 MPZL2O60487 215 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 HLA-HP01893 362 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SERPINA5P05154 406 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 ALPLP05186 524 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 THBDP07204 575 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 CD40P25942 277 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 CCKARP32238 428 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 APLNRP35414 380 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 FXYD6P3P58550 94 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SELENOVP59797 346 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 PPP2R2BQ00005 443 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 GALK2Q01415 458 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 TEKQ02763 1124 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 PIGFQ07326 219 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 ECH1Q13011 328 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 PTGES3Q15185 160 aaKnown RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 KCNMB1Q16558 191 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 TBC1D28Q2M2D7 210 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SLC35D3Q5M8T2 416 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 NCMAPQ5T1S8 102 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SLC22A25Q6T423 547 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SEZ6L2Q6UXD5 910 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 C20orf204Q6ZNR8 217 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 FOXL2NBQ6ZUU3 175 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 LINGO2Q7L985 606 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 ZBTB46Q86UZ6 589 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SKA3Q8IX90 412 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 LRRC18Q8N456 261 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SLC37A3Q8NCC5 494 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SDR9C7Q8NEX9 313 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 GJC3Q8NFK1 279 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 NMD3Q96D46 503 aaKnown RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF837Q96EG3 531 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 Q96MT0 163 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 SH3GL3Q99963 347 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 APOL4Q9BPW4 351 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 GABARAPL3Q9BY60 117 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 PLA2G12AQ9BZM1 189 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 RACGAP1Q9H0H5 632 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 FN3KQ9H479 309 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 RIBC2Q9H4K1 309 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 POLE4Q9NR33 117 aa7.22□□□□□ -1.25
SF3A1-208ENST00000485618 CRNNQ9UBG3 495 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 NDRG4Q9ULP0 352 aaKnown RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 COA3Q9Y2R0 106 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-208ENST00000485618 AKAP9Q99996 3911 aa7.21□□□□□ -1.25
SF3A1-208ENST00000485618 ZAR1LA6NP61 321 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ANKRD65E5RJM6 399 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 H7C1C5 153 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ABCD4O14678 606 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 EI24O14681 340 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 SURF4O15260 269 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 PRODHO43272 600 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 IGKV3-15P01624 115 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 CTLA4P16410 223 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 TUBG1P23258 451 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 CDAP32320 146 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ATP6V1E1P36543 226 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 RAD52P43351 418 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 GDI2P50395 445 aaKnown RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 IDH3GP51553 393 aaPredicted RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 FOXG1P55316 489 aaPredicted RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 RPS7P62081 194 aaKnown RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 RPS23P62266 143 aaKnown RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 LCN6P62502 163 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 ELF3P78545 371 aaPredicted RBP7.21□□□□□ -1.26
SF3A1-208ENST00000485618 SLC34A1Q06495 639 aa7.21□□□□□ -1.26
SF3A1-208ENST00000485618 FMODQ06828 376 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms