RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DDOQ99489 341 aa10.34□□□□□ -0.75
APTX-227ENST00000485479 RBM4Q9BWF3 364 aaKnown RBP10.34□□□□□ -0.75
APTX-227ENST00000485479 OR51B6Q9H340 312 aa10.34□□□□□ -0.75
APTX-227ENST00000485479 RNF121Q9H920 327 aa10.34□□□□□ -0.75
APTX-227ENST00000485479 POLE4Q9NR33 117 aa10.34□□□□□ -0.75
APTX-227ENST00000485479 AMDHD2Q9Y303 409 aa10.34□□□□□ -0.75
APTX-227ENST00000485479 RIIAD1A6NNX1 92 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 CENPBD1B2RD01 187 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 SURF4O15260 269 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 SNAP29O95721 258 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 TFP02787 698 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 ZNF32P17041 273 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 CD40P25942 277 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 CALCRP30988 508 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 MRPS34P82930 218 aaKnown RBP10.33□□□□□ -0.76
APTX-227ENST00000485479 ENDOGQ14249 297 aaKnown RBP10.33□□□□□ -0.76
APTX-227ENST00000485479 DAZAP2Q15038 168 aaPredicted RBP10.33□□□□□ -0.76
APTX-227ENST00000485479 BEX5Q5H9J7 111 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 NCMAPQ5T1S8 102 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 SLC22A25Q6T423 547 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 ZNF627Q7L945 461 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 P2RY8Q86VZ1 359 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 CDC20BQ86Y33 519 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 PARP8Q8N3A8 854 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 ZNF511Q8NB15 262 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 OR6K6Q8NGW6 343 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 SMAP2Q8WU79 429 aaPredicted RBP10.33□□□□□ -0.76
APTX-227ENST00000485479 C11orf40Q8WZ69 217 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 IL4I1Q96RQ9 567 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 RBM4BQ9BQ04 359 aaKnown RBP10.33□□□□□ -0.76
APTX-227ENST00000485479 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 OR10A4Q9H209 315 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 OR51V1Q9H2C8 321 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 HINT3Q9NQE9 182 aaKnown RBP10.33□□□□□ -0.76
APTX-227ENST00000485479 CMC2Q9NRP2 79 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 B3GNT2Q9NY97 397 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 AASSQ9UDR5 926 aa10.33□□□□□ -0.76
APTX-227ENST00000485479 ARPC4-TTLL3A0A0A6YYG9 625 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 FAM221AA4D161 298 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 IDH3BO43837 385 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 PRKYO43930 277 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 MGRN1O60291 552 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 KHDRBS3O75525 346 aaKnown RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 FARS2O95363 451 aaKnown RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 WNT11O96014 354 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ZNF3P17036 446 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 MSR1P21757 451 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 SNAPC1Q16533 368 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ZNF704Q6ZNC4 412 aaPredicted RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 PAQR4Q8N4S7 273 aaPredicted RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 LILRB1Q8NHL6 650 aaPredicted RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 UBE2FQ969M7 185 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ESRP2Q9H6T0 727 aaKnown RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 WDR76Q9H967 626 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 SIAEQ9HAT2 523 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ASH2LQ9UBL3 628 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 POU2F3Q9UKI9 436 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 SHISA9B4DS77 424 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 H0YHG0 523 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 RAB36O95755 333 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 IGKV3-15P01624 115 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 GAAP10253 952 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 NR2C1P13056 603 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 SPI1P17947 270 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 CCNOP22674 350 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 APEX1P27695 318 aaKnown RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 GRK5P34947 590 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ALDH3A2P51648 485 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 KLHL12Q53G59 568 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 PABPC1L2AQ5JQF8 200 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ZNF774Q6NX45 483 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 TMEM154Q6P9G4 183 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 VHLLQ6RSH7 139 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 TMEM108Q6UXF1 575 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 CPOQ8IVL8 374 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 GLB1L2Q8IW92 636 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 C10orf67Q8IYJ2 551 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 CPEB3Q8NE35 698 aaKnown RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 SLC7A6Q92536 515 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 PTP4A1Q93096 173 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 C14orf79Q96F83 325 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 ZNF75AQ96N20 296 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 MBOAT4Q96T53 435 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 TOR3AQ9H497 397 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 MRPL22Q9NWU5 206 aaKnown RBP10.32□□□□□ -0.76
APTX-227ENST00000485479 POLR1DQ9Y2S0 133 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
APTX-227ENST00000485479 NOTCH2Q04721 2471 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 PDZD2O15018 2839 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 ZAR1LA6NP61 321 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 RER1O15258 196 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 CD3EP07766 207 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 MMP7P09237 267 aaPredicted RBP10.31□□□□□ -0.76
APTX-227ENST00000485479 ZNF14P17017 642 aaPredicted RBP10.31□□□□□ -0.76
APTX-227ENST00000485479 CRABP1P29762 137 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 SSTR2P30874 369 aa10.31□□□□□ -0.76
APTX-227ENST00000485479 GUCA1AP43080 201 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms