RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 SEMA6DQ8NFY4 1073 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 MOSPD2Q8NHP6 518 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 BPIFA2Q96DR5 249 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 PRRC1Q96M27 445 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 FNDC11Q9BVV2 318 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 NDEL1Q9GZM8 345 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 SAP30LQ9HAJ7 183 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 SMURF2Q9HAU4 748 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 FGFR1OP2Q9NVK5 253 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 AP3M1Q9Y2T2 418 aa11.32□□□□□ -0.6
UBA3-210ENST00000485424 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 A0A1W2PPL8 197 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 C5orf49A4QMS7 147 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 FAM157AC9JC47 383 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 GSTA4O15217 222 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 CTXN1P60606 82 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
UBA3-210ENST00000485424 PCBD1P61457 104 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ERVK-25P63136 954 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 SELENOWP63302 87 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 FMODQ06828 376 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 THEM4Q5T1C6 240 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ARMC4Q5T2S8 1044 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 FAM205BPQ63HN1 556 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ACSM5Q6NUN0 579 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 FAHD2BQ6P2I3 314 aaPredicted RBP11.31□□□□□ -0.6
UBA3-210ENST00000485424 ARL9Q6T311 187 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 USP51Q70EK9 711 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ARPINQ7Z6K5 226 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 PEG10Q86TG7 708 aaKnown RBP11.31□□□□□ -0.6
UBA3-210ENST00000485424 C1orf174Q8IYL3 243 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 AKR7LQ8NHP1 331 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 LIPHQ8WWY8 451 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 HDAC2Q92769 488 aaKnown RBP11.31□□□□□ -0.6
UBA3-210ENST00000485424 RAB1CQ92928 201 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ELMOD3Q96FG2 381 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 FAHD2AQ96GK7 314 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ZNF583Q96ND8 569 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ALG12Q9BV10 488 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 NKIRAS2Q9NYR9 191 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 HIF3AQ9Y2N7 669 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 CAPN7Q9Y6W3 813 aa11.31□□□□□ -0.6
UBA3-210ENST00000485424 TGP01266 2768 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 ISPDA4D126 451 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 A6NIZ1 184 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 NPIPB13A6NJU9 1138 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 NPIPB4C9JG80 1138 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 FXYD1O00168 92 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 SPRY3O43610 288 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 VENTXO95231 258 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 PNPP00491 289 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 IFNW1P05000 195 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 MMP7P09237 267 aaPredicted RBP11.3□□□□□ -0.6
UBA3-210ENST00000485424 CFPP27918 469 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 RPL4P36578 427 aaKnown RBP11.3□□□□□ -0.6
UBA3-210ENST00000485424 LIPAP38571 399 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 CRYBB2P43320 205 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 ZNF133P52736 654 aaPredicted RBP11.3□□□□□ -0.6
UBA3-210ENST00000485424 RAP1BP61224 184 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 RAP1AP62834 184 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 SLC3A1Q07837 685 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 TRAM2Q15035 370 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 ZMAT1Q5H9K5 638 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 FKBP9P1Q75LS8 142 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 OAFQ86UD1 273 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 IGFN1Q86VF2 1251 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 ZNF418Q8TF45 676 aaPredicted RBP11.3□□□□□ -0.6
UBA3-210ENST00000485424 SEPHS2Q99611 448 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 EGLN1Q9GZT9 426 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 SAR1AQ9NR31 198 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 CYSLTR2Q9NS75 346 aa11.3□□□□□ -0.6
UBA3-210ENST00000485424 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 EFCAB9A8MZ26 197 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 XKRYO14609 159 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 WNT9BO14905 357 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 RP2O75695 350 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 MPZL1O95297 269 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 ZNF682O95780 498 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 IGHV3-13P01766 116 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 YAP1P46937 504 aaKnown RBP11.29□□□□□ -0.6
UBA3-210ENST00000485424 ANKDD1AQ495B1 522 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 SLC25A47Q6Q0C1 308 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 ZNF730Q6ZMV8 503 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 CYP4Z1Q86W10 505 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 TREML1Q86YW5 311 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 OR51A7Q8NH64 312 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 ABHD4Q8TB40 342 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 SLC25A40Q8TBP6 338 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 NABP1Q96AH0 204 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 RCN3Q96D15 328 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 GAL3ST1Q99999 423 aa11.29□□□□□ -0.6
UBA3-210ENST00000485424 PLA2G12AQ9BZM1 189 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms