RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PRSS37A4D1T9 235 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 EPOPA6NHQ4 379 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 TNFSF11O14788 317 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 SLC31A2O15432 143 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 YKT6O15498 198 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 AIFM1O95831 613 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 KRT16P08779 473 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 CSF3P09919 207 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 CHTF8P0CG12 524 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L2P0CJ85 424 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L3P0CJ86 424 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L4P0CJ87 422 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L5P0CJ88 424 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L6P0CJ89 424 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L7P0CJ90 424 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 NR2C1P13056 603 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 HPGDP15428 266 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 GATA2P23769 480 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 GABRR2P28476 465 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 GPX4P36969 197 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 GPR1P46091 355 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 KRTAP10-3P60369 221 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 XIAPP98170 497 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 TWF1Q12792 350 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 SLAQ13239 276 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 CLINT1Q14677 625 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 NSDHLQ15738 373 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 LPAL2Q16609 132 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 TRMT5Q32P41 509 aaKnown RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4L9Q6RFH8 374 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 ASCL4Q6XD76 172 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 C14orf178Q8N769 122 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DRAXINQ8NBI3 349 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 TMIGD2Q96BF3 282 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 APH1AQ96BI3 265 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 SERPINB12Q96P63 405 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 UBXN6Q9BZV1 441 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 TM6SF2Q9BZW4 377 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 BEX1Q9HBH7 125 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 ACP6Q9NPH0 428 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 CCL28Q9NRJ3 127 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 DUX4Q9UBX2 424 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF282Q9UDV7 671 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF107Q9UII5 783 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 NAP1L2Q9ULW6 460 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 KPTNQ9Y664 436 aa3.28□□□□□ -1.88
VPS13A-211ENST00000484581 COL5A2P05997 1499 aaPredicted RBP3.28□□□□□ -1.88
VPS13A-211ENST00000484581 ADGRA3Q8IWK6 1321 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 TSPAN11A1L157 253 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 PSMB11A5LHX3 300 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 CENPXA8MT69 81 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 KRTAP4-16G5E9R7 235 aaPredicted RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 H0YHG0 523 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 SMKR1H3BMG3 65 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 K7ERQ8 282 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 SLC9A3R1O14745 358 aaPredicted RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 RAD51CO43502 376 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 XRCC2O43543 280 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 DPM1O60762 260 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 LSM8O95777 96 aaKnown RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 C6orf47O95873 294 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 NPPAP01160 153 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 APOA1P02647 267 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 ARG1P05089 322 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 TACSTD2P09758 323 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 CALM1P0DP23 149 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 CALM2P0DP24 149 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 CALM3P0DP25 149 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 HOXB8P17481 243 aaPredicted RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 BTCP35070 178 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 MECOMQ03112 1051 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 AQP6Q13520 282 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 FZD2Q14332 565 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 GGTLC2Q14390 218 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 OR7A5Q15622 319 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 SLC1A5Q15758 541 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 UBE2UQ5VVX9 321 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 ZNF547Q8IVP9 402 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 ZBED8Q8IZ13 594 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 TMEM61Q8N0U2 210 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 PNKDQ8N490 385 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 TRAM1L1Q8N609 369 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 ISOC2Q96AB3 205 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 ANKRD9Q96BM1 317 aaPredicted RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 RPUSD4Q96CM3 377 aaKnown RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 OR11A1Q9GZK7 315 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 RPF2Q9H7B2 306 aaKnown RBP3.27□□□□□ -1.89
VPS13A-211ENST00000484581 CD209Q9NNX6 404 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 CLEC4EQ9ULY5 219 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 DDX19BQ9UMR2 479 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 SMAD5-AS1Q9Y6J3 95 aa3.27□□□□□ -1.89
VPS13A-211ENST00000484581 FAM168BA1KXE4 195 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 SLC22A20A6NK97 555 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 ZFP92A6NM28 416 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 K7EMT4 169 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 POLR3GO15318 223 aaPredicted RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 NUPL2O15504 423 aaKnown RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 SRP72O76094 671 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms