RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 KLK2P20151 261 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 GRNP28799 593 aaKnown RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 SELENOPP49908 381 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 TDGF1P3P51864 188 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 MRPL28Q13084 256 aaKnown RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 IRF3Q14653 427 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 C1orf185Q5T7R7 199 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 LSRQ86X29 649 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 ERI1Q8IV48 349 aaKnown RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 NANOGP1Q8N7R0 232 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 OR4F15Q8NGB8 312 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 OR52N1Q8NH53 320 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 TSSK2Q96PF2 358 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 WDR76Q9H967 626 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 ACOT13Q9NPJ3 140 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 UPB1Q9UBR1 384 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 FOXD3Q9UJU5 478 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 ING1Q9UK53 422 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 COA3Q9Y2R0 106 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 CAB39Q9Y376 341 aaPredicted RBP12.36□□□□□ -0.43
SMAD9-204ENST00000483941 MED12Q93074 2177 aa12.36□□□□□ -0.43
SMAD9-204ENST00000483941 HIVEP1P15822 2718 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 MBD3L4A6NDZ8 208 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 MBD3L3A6NE82 208 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 MBD3L5A6NJ08 208 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 C12orf71A8MTZ7 269 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 ZNF587BE7ETH6 402 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 TGM6O95932 706 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 IL2RAP01589 272 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 HTR1AP08908 422 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 TIMP3P35625 211 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 ENTPD1P49961 510 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 PER3P56645 1201 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 ADAM8P78325 824 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 EGR3Q06889 387 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 GALEQ14376 348 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 NEDD8Q15843 81 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 SLC18B1Q6NT16 456 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 KCTD18Q6PI47 426 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 LRFN4Q6PJG9 635 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 PLEKHG7Q6ZR37 379 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 FAM214BQ7L5A3 538 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 GPR141Q7Z602 305 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 TIGD4Q8IY51 512 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 SNX33Q8WV41 574 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 NSMAFQ92636 917 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 RBM24Q9BX46 236 aaKnown RBP12.35□□□□□ -0.43
SMAD9-204ENST00000483941 KCNN2Q9H2S1 579 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 SEC61A2Q9H9S3 476 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 ISYNA1Q9NPH2 558 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 ERVK13-1Q9NX77 482 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
SMAD9-204ENST00000483941 A0A1W2PPL8 197 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 FAM171A2A8MVW0 826 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 DCTN6O00399 190 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-204ENST00000483941 FARS2O95363 451 aaKnown RBP12.34□□□□□ -0.43
SMAD9-204ENST00000483941 MT-ND5P03915 603 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 TFAP2AP05549 437 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 MRPL3P09001 348 aaKnown RBP12.34□□□□□ -0.43
SMAD9-204ENST00000483941 PRF1P14222 555 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 PCMT1P22061 227 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 AGTR1P30556 359 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-204ENST00000483941 WNT4P56705 351 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 TAS2R43P59537 309 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 FMODQ06828 376 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 PIGFQ07326 219 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 SPHARQ15513 63 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 HSPB2Q16082 182 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 CD163Q86VB7 1156 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 SYS1Q8N2H4 156 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 ZNF511Q8NB15 262 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 SLC26A10Q8NG04 563 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 OR6K3Q8NGY3 331 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 OR2AJ1Q8NGZ0 328 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-204ENST00000483941 TTYH2Q9BSA4 534 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 RHNO1Q9BSD3 238 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 ALG8Q9BVK2 526 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 ASF1BQ9NVP2 202 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 POLR1DQ9Y2S0 133 aa12.34□□□□□ -0.43
SMAD9-204ENST00000483941 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-204ENST00000483941 SLC19A2O60779 497 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 SULT1C4O75897 302 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 MSR1P21757 451 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms