RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NEIL3Q8TAT5 605 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 SETD6Q8TBK2 473 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 THEM6Q8WUY1 208 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 PHYHIPQ92561 330 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 HES7Q9BYE0 225 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 GRIP1Q9Y3R0 1128 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 PRR32B1ATL7 298 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 NPIPA2E9PIF3 369 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 NPIPA3F8WFD2 350 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 EIF1AYO14602 144 aaKnown RBP23.36■■□□□ 1.33
SHOX2-204ENST00000483851 MAGEB4O15481 346 aaPredicted RBP23.36■■□□□ 1.33
SHOX2-204ENST00000483851 UPK3AO75631 287 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 GPANK1O95872 356 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 EDNRAP25101 427 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 ARG2P78540 354 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 ZMAT1Q5H9K5 638 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 IGFL2Q6UWQ7 119 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 GALNTL5Q7Z4T8 443 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 YIPF7Q8N8F6 280 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 ZFP62Q8NB50 900 aaPredicted RBP23.36■■□□□ 1.33
SHOX2-204ENST00000483851 OR9K2Q8NGE7 335 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 AP3S1Q92572 193 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 OR8B4Q96RC9 309 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 KCNG2Q9UJ96 466 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 TRABD2BA6NFA1 517 aa23.35■■□□□ 1.33
SHOX2-204ENST00000483851 TMCC2O75069 709 aa23.35■■□□□ 1.33
SHOX2-204ENST00000483851 GATBO75879 557 aaKnown RBP23.35■■□□□ 1.33
SHOX2-204ENST00000483851 MTNR1BP49286 362 aa23.35■■□□□ 1.33
SHOX2-204ENST00000483851 CAMK2DQ13557 499 aa23.35■■□□□ 1.33
SHOX2-204ENST00000483851 LIPNQ5VXI9 398 aa23.35■■□□□ 1.33
SHOX2-204ENST00000483851 INTS12Q96CB8 462 aaKnown RBP23.35■■□□□ 1.33
SHOX2-204ENST00000483851 CD8B2A6NJW9 211 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 SPARCP09486 303 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 OR8G3PP0DMU2 310 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 CD8BP10966 210 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 WT1P19544 449 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 MEOX1P50221 254 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 PLGLB1Q02325 96 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 NHLH1Q02575 133 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 SRSF6Q13247 344 aaKnown RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 DDI2Q5TDH0 399 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 FDX2Q6P4F2 183 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 SLC25A47Q6Q0C1 308 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 ZNF679Q8IYX0 411 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 CPNE4Q96A23 557 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 SRXN1Q9BYN0 137 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 IKZF2Q9UKS7 526 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 ARPC4-TTLL3A0A0A6YYG9 625 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 SMAD9O15198 467 aaKnown RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 LAP3P28838 519 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 ZNF133P52736 654 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 CLDN17P56750 224 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 INSL4Q14641 139 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 BAK1Q16611 211 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 XKRXQ6PP77 449 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 CCBE1Q6UXH8 406 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 TMEM251Q8N6I4 163 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 RNF166Q96A37 237 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 PNPLA2Q96AD5 504 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 SOSTQ9BQB4 213 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.34■■□□□ 1.33
SHOX2-204ENST00000483851 ACKR4Q9NPB9 350 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 MED12Q93074 2177 aa23.34■■□□□ 1.33
SHOX2-204ENST00000483851 CASKO14936 926 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 KLK2P20151 261 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 CAV3P56539 151 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 BCL2A1Q16548 175 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 DEGS2Q6QHC5 323 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 UCN2Q96RP3 112 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 ATF6BQ99941 703 aa23.33■■□□□ 1.33
SHOX2-204ENST00000483851 IGKV1D-43A0A0B4J1Z2 117 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 CFL1P23528 166 aaKnown RBP23.32■■□□□ 1.32
SHOX2-204ENST00000483851 ALKBH1Q13686 389 aaKnown RBP23.32■■□□□ 1.32
SHOX2-204ENST00000483851 ACSM3Q53FZ2 586 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 YIF1BQ5BJH7 314 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF766Q5HY98 468 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 TPRA1Q86W33 373 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 OR8H2Q8N162 312 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 OR10D3Q8NH80 312 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 CHAC2Q8WUX2 184 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF281Q9Y2X9 895 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 ZNF254O75437 659 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 IL7P13232 177 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 PSMB10P40306 273 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 TNFSF10P50591 281 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 CCL11P51671 97 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 SUCLG1P53597 346 aaKnown RBP23.32■■□□□ 1.32
SHOX2-204ENST00000483851 EIF2B1Q14232 305 aaKnown RBP23.32■■□□□ 1.32
SHOX2-204ENST00000483851 KCNMB1Q16558 191 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 CEACAM19Q7Z692 300 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 OR10H5Q8NGA6 315 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 OR52N5Q8NH56 324 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 SLC39A7Q92504 469 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 TMEM54Q969K7 222 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 MCHR2Q969V1 340 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 ABHD6Q9BV23 337 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 CCDC86Q9H6F5 360 aaKnown RBP23.32■■□□□ 1.32
SHOX2-204ENST00000483851 PAQR5Q9NXK6 330 aaPredicted RBP23.32■■□□□ 1.32
SHOX2-204ENST00000483851 RCE1Q9Y256 329 aa23.32■■□□□ 1.32
SHOX2-204ENST00000483851 CEP250Q9BV73 2442 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms