RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 S100A5P33763 92 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 LHX2P50458 406 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 CDC20Q12834 499 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 HNRNPA0Q13151 305 aaKnown RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 BCL2A1Q16548 175 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 YIF1BQ5BJH7 314 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ZMAT1Q5H9K5 638 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 OTPQ5XKR4 325 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 DEGS2Q6QHC5 323 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 LRRC69Q6ZNQ3 347 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 CCDC190Q86UF4 302 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 OR52N5Q8NH56 324 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 KCNS3Q9BQ31 491 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 PDCD1LG2Q9BQ51 273 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 SMURF1Q9HCE7 757 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ACKR4Q9NPB9 350 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 IKZF2Q9UKS7 526 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 GVINP1Q7Z2Y8 2422 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ZNF292O60281 2723 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CFAP54Q96N23 3096 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 NPIPA3F8WFD2 350 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CXCL13O43927 109 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ZNF254O75437 659 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CEACAM4O75871 244 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CELA3AP09093 270 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 QDPRP09417 244 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 SDHBP21912 280 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CD40LGP29965 261 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 MAGEA5P43359 124 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ID4P47928 161 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CCR9P51686 369 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 PPP5CP53041 499 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ZNF45Q02386 682 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
CLK3-204ENST00000483723 C10orf128Q5T292 105 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 PDSS1Q5T2R2 415 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ABLIM2Q6H8Q1 611 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 FOXL2NBQ6ZUU3 175 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 FDCSPQ8NFU4 85 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 OR13C5Q8NGS8 318 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 HSD17B8Q92506 261 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 RGP1Q92546 391 aaPredicted RBP12.47□□□□□ -0.41
CLK3-204ENST00000483723 NSMAFQ92636 917 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 MROQ9BYG7 248 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ZCCHC4Q9H5U6 513 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
CLK3-204ENST00000483723 ARPC4-TTLL3A0A0A6YYG9 625 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 EFSO43281 561 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 TMCC2O75069 709 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 SRSF10O75494 262 aaKnown RBP12.46□□□□□ -0.41
CLK3-204ENST00000483723 RPP14O95059 124 aaKnown RBP12.46□□□□□ -0.41
CLK3-204ENST00000483723 RFC3P40938 356 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 TNFSF10P50591 281 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 CCL11P51671 97 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 CLDN18P56856 261 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 ARG2P78540 354 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 ZNF766Q5HY98 468 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 FAM27D1Q5T7N8 215 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 CARD17Q5XLA6 110 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 LRRN1Q6UXK5 716 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 TMEM178AQ8NBL3 297 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 CPNE4Q96A23 557 aaPredicted RBP12.46□□□□□ -0.41
CLK3-204ENST00000483723 TIGARQ9NQ88 270 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 FOXD3Q9UJU5 478 aaPredicted RBP12.46□□□□□ -0.41
CLK3-204ENST00000483723 CDV3Q9UKY7 258 aaKnown RBP12.46□□□□□ -0.41
CLK3-204ENST00000483723 UGT2A1Q9Y4X1 527 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 FLVCR1Q9Y5Y0 555 aa12.46□□□□□ -0.41
CLK3-204ENST00000483723 TRBV5-5A0A0J9YX44 114 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 PIN1P1O15428 100 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 CYTIPO60759 359 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 ZNF708P17019 499 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 CFL1P23528 166 aaKnown RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 CALRP27797 417 aaKnown RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 TNFSF8P32971 234 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 CAV3P56539 151 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 PPIAP62937 165 aaKnown RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 PHYHD1Q5SRE7 291 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 DCXRQ7Z4W1 244 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.45□□□□□ -0.42
CLK3-204ENST00000483723 KRT77Q7Z794 578 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 NR2C2APQ86WQ0 139 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 C20orf196Q8IYI0 205 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 PRSS35Q8N3Z0 413 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 RNF133Q8WVZ7 376 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 AP3S1Q92572 193 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 C4orf45Q96LM5 186 aa12.45□□□□□ -0.42
CLK3-204ENST00000483723 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLK3-204ENST00000483723 RCE1Q9Y256 329 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms