RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.2□□□□□ -0.14
VHL-203ENST00000477538 USP9XQ93008 2570 aaPredicted RBP14.2□□□□□ -0.14
VHL-203ENST00000477538 RELNP78509 3460 aa14.2□□□□□ -0.14
VHL-203ENST00000477538 A0A096LPE4 126 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 A0A1W2PPZ6 126 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 SH3D21A4FU49 640 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 FARS2O95363 451 aaKnown RBP14.19□□□□□ -0.14
VHL-203ENST00000477538 TFP02787 698 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 SCG5P05408 212 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 OR8G3PP0DMU2 310 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 IL32P24001 234 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 TMED1Q13445 227 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 MED21Q13503 144 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 GABRA6Q16445 453 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 KCNMB1Q16558 191 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 MEP1BQ16820 701 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 OTPQ5XKR4 325 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 OR7E24Q6IFN5 339 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 LAIR2Q6ISS4 152 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 OR10H5Q8NGA6 315 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 C11orf40Q8WZ69 217 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 BCL2L2Q92843 193 aaPredicted RBP14.19□□□□□ -0.14
VHL-203ENST00000477538 RNASE6Q93091 150 aaKnown RBP14.19□□□□□ -0.14
VHL-203ENST00000477538 HDHD5Q9BXW7 423 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 MARCH7Q9H992 704 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 SIAEQ9HAT2 523 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 EMC7Q9NPA0 242 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 LRRC42Q9Y546 428 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 COMMD3-BMI1R4GMX3 469 aa14.19□□□□□ -0.14
VHL-203ENST00000477538 C16orf97H3BN30 126 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 HRGP04196 525 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 ZNF823P16415 610 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 CCKARP32238 428 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 UGT2B10P36537 528 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 ADAM8P78325 824 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 ZNF91Q05481 1191 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 GGTLC2Q14390 218 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 TBRG1Q3YBR2 411 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 HIKESHIQ53FT3 197 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 FAM27BQ5VT28 67 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 ERI1Q8IV48 349 aaKnown RBP14.18□□□□□ -0.14
VHL-203ENST00000477538 LRRC18Q8N456 261 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 STEAP2Q8NFT2 490 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 BOD1Q96IK1 185 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 INTS14Q96SY0 518 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 SH3GL3Q99963 347 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 WDR76Q9H967 626 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 AMBNQ9NP70 447 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 POLR1DQ9Y2S0 133 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 RPL36Q9Y3U8 105 aaKnown RBP14.18□□□□□ -0.14
VHL-203ENST00000477538 DOPEY1Q5JWR5 2465 aa14.18□□□□□ -0.14
VHL-203ENST00000477538 SELENOFO60613 162 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 MRPL3P09001 348 aaKnown RBP14.17□□□□□ -0.14
VHL-203ENST00000477538 DBTP11182 482 aaKnown RBP14.17□□□□□ -0.14
VHL-203ENST00000477538 HOXC12P31275 282 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 NAA10P41227 235 aaPredicted RBP14.17□□□□□ -0.14
VHL-203ENST00000477538 MTNR1AP48039 350 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 ENTPD1P49961 510 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 LSM6P62312 80 aaKnown RBP14.17□□□□□ -0.14
VHL-203ENST00000477538 SRSF1Q07955 248 aaKnown RBP eCLIP14.17□□□□□ -0.144e-8■■■□□ 17.9
VHL-203ENST00000477538 POU4F2Q12837 409 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 ENDOGQ14249 297 aaKnown RBP14.17□□□□□ -0.14
VHL-203ENST00000477538 C6orf141Q5SZD1 244 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 UGT2A3Q6UWM9 527 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 SLC16A14Q7RTX9 510 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 SKA3Q8IX90 412 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 TIGD4Q8IY51 512 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 C17orf78Q8N4C9 275 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 OR51G2Q8NGK0 314 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 OR6N2Q8NGY6 317 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 S100PBPQ96BU1 408 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 RNFT2Q96EX2 444 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 CNN2Q99439 309 aaKnown RBP14.17□□□□□ -0.14
VHL-203ENST00000477538 ZNF416Q9BWM5 594 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 KCNN2Q9H2S1 579 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 SLC17A5Q9NRA2 495 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 HAO2Q9NYQ3 351 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 KCNG2Q9UJ96 466 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 PCDHGB5Q9Y5G0 923 aa14.17□□□□□ -0.14
VHL-203ENST00000477538 WIPF3A6NGB9 483 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 OR5H1A6NKK0 313 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 C12orf71A8MTZ7 269 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 SLC1A7O00341 560 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 ZNF593O00488 134 aaPredicted RBP14.16□□□□□ -0.14
VHL-203ENST00000477538 FAM20BO75063 409 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 APOL3O95236 402 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 CST2P09228 141 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 SPARCP09486 303 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 RNF224P0DH78 156 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 HOXB1P14653 301 aaPredicted RBP14.16□□□□□ -0.14
VHL-203ENST00000477538 GRNP28799 593 aaKnown RBP14.16□□□□□ -0.14
VHL-203ENST00000477538 RPS27P42677 84 aaKnown RBP14.16□□□□□ -0.14
VHL-203ENST00000477538 CAPZA2P47755 286 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 UBE2NP61088 152 aaKnown RBP14.16□□□□□ -0.14
VHL-203ENST00000477538 TFF3Q07654 80 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 SLC16A9Q7RTY1 509 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 BPIFB6Q8NFQ5 453 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 SSC4DQ8WTU2 575 aa14.16□□□□□ -0.14
VHL-203ENST00000477538 NANOS1Q8WY41 292 aaKnown RBP14.16□□□□□ -0.14
VHL-203ENST00000477538 ACTR6Q9GZN1 396 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms