RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 NAXDQ8IW45 347 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 OR1S2Q8NGQ3 325 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 UCN3Q969E3 161 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 WBP2Q969T9 261 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ARV1Q9H2C2 271 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 PATZ1Q9HBE1 687 aaKnown RBP10.05□□□□□ -0.8
VAPB-204ENST00000475243 CRYM-AS1A6NIL9 109 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 HLA-DOBP13765 273 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 NAGAP17050 411 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 BTG2P78543 158 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 HSF1Q00613 529 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 PYCR3Q53H96 274 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 DMRTC1Q5HYR2 192 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 DPPA2Q7Z7J5 298 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 LACC1Q8IV20 430 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SLC30A7Q8NEW0 376 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 NT5DC2Q9H857 520 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 RAB22AQ9UL26 194 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ZNF318Q5VUA4 2279 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SGCEO43556 437 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 CPT2P23786 658 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SVBPQ8N300 66 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 FCRL1Q96LA6 429 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SEC22CQ9BRL7 303 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 OR11A1Q9GZK7 315 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 TAS2R4Q9NYW5 299 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 CTSFQ9UBX1 484 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 PPT2Q9UMR5 302 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 OSGIN2Q9Y236 505 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 CORINQ9Y5Q5 1042 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 C5orf49A4QMS7 147 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 TNFSF11O14788 317 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SNRNP200O75643 2136 aaKnown RBP10.05□□□□□ -0.8
VAPB-204ENST00000475243 S100A7P31151 101 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
VAPB-204ENST00000475243 GNB2P62879 340 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ZNF77Q15935 545 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SEMA6DQ8NFY4 1073 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SLC16A6O15403 523 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 HMGA1P17096 107 aaKnown RBP10.05□□□□□ -0.8
VAPB-204ENST00000475243 GRB2P62993 217 aaKnown RBP10.05□□□□□ -0.8
VAPB-204ENST00000475243 LPCAT3Q6P1A2 487 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ZNF75AQ96N20 296 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 GPR78Q96P69 363 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 C20orf24Q9BUV8 137 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 RNF167Q9H6Y7 350 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 CRLF2Q9HC73 371 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 YIF1AO95070 293 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ETV1P50549 477 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ZMAT1Q5H9K5 638 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 ANKRD16Q6P6B7 361 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
VAPB-204ENST00000475243 TMEM38AQ9H6F2 299 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 TAS2R5Q9NYW4 299 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 CHRNA9Q9UGM1 479 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
VAPB-204ENST00000475243 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 EDIL3O43854 480 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 PAPLNO95428 1278 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 HNF1AP20823 631 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 FAM71E1Q6IPT2 247 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 GRINAQ7Z429 371 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 MS4A6EQ96DS6 147 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 TCRBP04435 133 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CASP3P42574 277 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 IAH1Q2TAA2 248 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 MDGA2Q7Z553 956 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 SPRED1Q7Z699 444 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 BCORP1Q8N888 145 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 C3orf49Q96BT1 292 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 PTTG3PQ9NZH4 202 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 URGCP-MRPS24S4R325 110 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 SPTBP11277 2137 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CSF3P09919 207 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A6P0DMU7 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A5P0DMU8 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A7P0DMV0 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A8P0DMV1 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A9P0DMV2 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 HIST1H1CP16403 213 aaKnown RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 MTNR1BP49286 362 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A2Q5DJT8 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A1Q5HYN5 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 CT45A3Q8NHU0 189 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 SDF2Q99470 211 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 SEMA4CQ9C0C4 833 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 MUTYHQ9UIF7 546 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 AGAP14A8MT82 685 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 AIPO00170 330 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 MAGEB4O15481 346 aaPredicted RBP10.04□□□□□ -0.8
VAPB-204ENST00000475243 TGM6O95932 706 aa10.04□□□□□ -0.8
VAPB-204ENST00000475243 LGI1O95970 557 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms