RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 UGT2A3Q6UWM9 527 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 LYPD4Q6UWN0 246 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF813Q6ZN06 617 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF771Q7L3S4 317 aaPredicted RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 HDDC2Q7Z4H3 204 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ZBTB46Q86UZ6 589 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SLC37A3Q8NCC5 494 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 BBS1Q8NFJ9 593 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 STEAP2Q8NFT2 490 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 OR2T33Q8NG76 320 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 OR52L1Q8NGH7 329 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 OR52E2Q8NGJ4 325 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 OR52N5Q8NH56 324 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 TEX47Q8TBZ9 253 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 FAM222BQ8WU58 562 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 DNAJC9Q8WXX5 260 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 STMN2Q93045 179 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 FBXO17Q96EF6 278 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ZC3HAV1LQ96H79 300 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 DACH2Q96NX9 599 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 HS3ST6Q96QI5 342 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SNX18Q96RF0 628 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 FOXB1Q99853 325 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 RBM4BQ9BQ04 359 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 C1QTNF6Q9BXI9 259 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 GRIP2Q9C0E4 1043 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 OR10A4Q9H209 315 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 DCLRE1BQ9H816 532 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 MED20Q9H944 212 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 SEC61A2Q9H9S3 476 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF556Q9HAH1 456 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 RNPEPL1Q9HAU8 725 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 HINT3Q9NQE9 182 aaKnown RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 CMC2Q9NRP2 79 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 KRT84Q9NSB2 600 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 B9D1Q9UPM9 204 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 POFUT2Q9Y2G5 429 aa6.09□□□□□ -1.43
LIMD1-204ENST00000474665 COA3Q9Y2R0 106 aaPredicted RBP6.09□□□□□ -1.43
LIMD1-204ENST00000474665 CHD3Q12873 2000 aaKnown RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 ARPC4-TTLL3A0A0A6YYG9 625 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 CIB4A0PJX0 185 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 FAM183AA6NL82 134 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 FAM171A2A8MVW0 826 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 XKRYO14609 159 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SLC16A7O60669 478 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 F12P00748 615 aaPredicted RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 IGLV1-44P01699 117 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 HLA-HP01893 362 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 TFP02787 698 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 HRGP04196 525 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 GYPBP06028 91 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 CELA3BP08861 270 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 MMP7P09237 267 aaPredicted RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 PPP3CBP16298 524 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SLC2A5P22732 501 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 CRYGSP22914 178 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 LAP3P28838 519 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 PYCR1P32322 319 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SLC25A1P53007 311 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 TGFBR3Q03167 851 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 PPA1Q15181 289 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 TRIP10Q15642 601 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 MEP1BQ16820 701 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 LRRC36Q1X8D7 754 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 ZIK1Q3SY52 487 aaPredicted RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 FAM27BQ5VT28 67 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 OR7E24Q6IFN5 339 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 ZBTB49Q6ZSB9 765 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 ABHD12BQ7Z5M8 362 aaPredicted RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 BCDIN3DQ7Z5W3 292 aaKnown RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 P2RY8Q86VZ1 359 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 WFDC8Q8IUA0 241 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF584Q8IVC4 421 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 C17orf78Q8N4C9 275 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SLC22A24Q8N4F4 322 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SLC26A10Q8NG04 563 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 OR51L1Q8NGJ5 315 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 OR9Q1Q8NGQ5 310 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 HSD17B8Q92506 261 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 RBP7Q96R05 134 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SH3GL3Q99963 347 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 MED18Q9BUE0 208 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 C9orf16Q9BUW7 83 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF416Q9BWM5 594 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 RACGAP1Q9H0H5 632 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 TOR3AQ9H497 397 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 SRA1Q9HD15 236 aaKnown RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 EMC7Q9NPA0 242 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 B3GAT2Q9NPZ5 323 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 RPRD1BQ9NQG5 326 aaKnown RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 POLE4Q9NR33 117 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 MRPL22Q9NWU5 206 aaKnown RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 KIF17Q9P2E2 1029 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 CRNNQ9UBG3 495 aaPredicted RBP6.08□□□□□ -1.44
LIMD1-204ENST00000474665 AASSQ9UDR5 926 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 KCNN3Q9UGI6 736 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 BAIAP2Q9UQB8 552 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 FKBP7Q9Y680 259 aa6.08□□□□□ -1.44
LIMD1-204ENST00000474665 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms