RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 POT1Q9NUX5 634 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 CPNE7Q9UBL6 633 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 DAPP1Q9UN19 280 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 PCDHB10Q9UN67 800 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 HIF3AQ9Y2N7 669 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 IER3IP1Q9Y5U9 82 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 NUP210LQ5VU65 1888 aa7.29□□□□□ -1.24
CCDC93-208ENST00000474546 MDC1Q14676 2089 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 COL4A2P08572 1712 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 COL6A6A6NMZ7 2263 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 TRAV18A0A075B6X5 111 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 TRAV27A0A087WT01 109 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 LGALS8O00214 317 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 MFNGO00587 321 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PIN1P1O15428 100 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 TNFSF14O43557 240 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 HLA-AP01891 365 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 IFNA6P05013 189 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 SLC35E2P0CK97 266 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 GLULP15104 373 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FUT1P19526 365 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PTAFRP25105 342 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 GALNSP34059 522 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 SLC6A9P48067 706 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 POU3F4P49335 361 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 CSNK1EP49674 416 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 RAB5CP51148 216 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 NTHL1P78549 312 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 SIM1P81133 766 aaPredicted RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 LSM11P83369 360 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 DHRS2Q13268 280 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 TAF13Q15543 124 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 LTB4RQ15722 352 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FAM76BQ5HYJ3 339 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FHL5Q5TD97 284 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 C18orf63Q68DL7 685 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FCRLBQ6BAA4 426 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 LILRA6Q6PI73 481 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PAPD4Q6PIY7 484 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 DEGS2Q6QHC5 323 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 ZNF704Q6ZNC4 412 aaPredicted RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 HIST2H3AQ71DI3 136 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 CDC20BQ86Y33 519 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 ARRDC1Q8N5I2 433 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 LINC01555Q8NAE3 123 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 OR4K13Q8NH42 304 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 DUSP19Q8WTR2 217 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 TSEN15Q8WW01 171 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 TMEM106AQ96A25 262 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FAM3DQ96BQ1 224 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PIK3IP1Q96FE7 263 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PEX11GQ96HA9 241 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 INTS14Q96SY0 518 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PDCD1LG2Q9BQ51 273 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 CCDC3Q9BQI4 270 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FAM117AQ9C073 453 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 EGLN1Q9GZT9 426 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 S1PR5Q9H228 398 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 OR51M1Q9H341 326 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 OPA3Q9H6K4 179 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 Q9N2J8 555 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 RAB18Q9NP72 206 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 ZDHHC4Q9NPG8 344 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 C20orf141Q9NUB4 165 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 MRPL15Q9P015 296 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 METTL1Q9UBP6 276 aaKnown RBP7.28□□□□□ -1.24
CCDC93-208ENST00000474546 FBLN5Q9UBX5 448 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 RAB22AQ9UL26 194 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 DHDHQ9UQ10 334 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PLEKHM1Q9Y4G2 1056 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 OR1A2Q9Y585 309 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 HCFC2Q9Y5Z7 792 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 KCNE3Q9Y6H6 103 aa7.28□□□□□ -1.24
CCDC93-208ENST00000474546 PTPRQQ9UMZ3 2332 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 PIGBOS1A0A0B4J2F0 54 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 TCRBV16S1A1N1A0A5B0 115 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 GLOD5A6NK44 160 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 ELOA3DA6NLF2 546 aaPredicted RBP7.27□□□□□ -1.25
CCDC93-208ENST00000474546 OR4C45A6NMZ5 311 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 POM121CA8CG34 1229 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 UBE2CO00762 179 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 DVL2O14641 736 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 ZNF208O43345 1280 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 TGOLN2O43493 480 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 DOK2O60496 412 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 SIX6O95475 246 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 CBX7O95931 251 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 AMY2AP04746 511 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 CHRM2P08172 466 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 CISD3P0C7P0 127 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 SMIM10L1P0DMW3 83 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 LYL1P12980 280 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 HTR2CP28335 458 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 NAA10P41227 235 aaPredicted RBP7.27□□□□□ -1.25
CCDC93-208ENST00000474546 PPICP45877 212 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 CAV2P51636 162 aa7.27□□□□□ -1.25
CCDC93-208ENST00000474546 F2RL1P55085 397 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms