RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 LOXL1Q08397 574 aaPredicted RBP3.07□□□□□ -1.92
CLK1-209ENST00000472679 PON2Q15165 354 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 CEP55Q53EZ4 464 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 CCNJQ5T5M9 372 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 B3GNT7Q8NFL0 401 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 OR9K2Q8NGE7 335 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 OR10J6PQ8NGY7 276 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 ABHD3Q8WU67 409 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 ESR2Q92731 530 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 PKNOX2Q96KN3 472 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 ZNF578Q96N58 590 aaPredicted RBP3.07□□□□□ -1.92
CLK1-209ENST00000472679 SERPINB12Q96P63 405 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 UBE2ZQ9H832 354 aaPredicted RBP3.07□□□□□ -1.92
CLK1-209ENST00000472679 COX16Q9P0S2 106 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 UVRAGQ9P2Y5 699 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 NUP50Q9UKX7 468 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 RBFOX2O43251 390 aaKnown RBP eCLIP3.06□□□□□ -1.92
CLK1-209ENST00000472679 ZNF207O43670 478 aaKnown RBP3.06□□□□□ -1.92
CLK1-209ENST00000472679 EEDO75530 441 aaKnown RBP3.06□□□□□ -1.92
CLK1-209ENST00000472679 CLPXO76031 633 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 SLC25A14O95258 325 aaPredicted RBP3.06□□□□□ -1.92
CLK1-209ENST00000472679 CD5P06127 495 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 SLC2A3P11169 496 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 ZNF250P15622 560 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 SSR4P51571 173 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 SLC25A11Q02978 314 aaKnown RBP3.06□□□□□ -1.92
CLK1-209ENST00000472679 MXD1Q05195 221 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 TWF1Q12792 350 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 TCP10Q12799 353 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 TNS2Q63HR2 1409 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 RNASEKQ6P5S7 137 aaKnown RBP3.06□□□□□ -1.92
CLK1-209ENST00000472679 ARL9Q6T311 187 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 PLET1Q6UQ28 207 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 CCDC73Q6ZRK6 1079 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 ZFP41Q8N8Y5 198 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 ZNF606Q8WXB4 792 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 ATP5SQ99766 215 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 ING2Q9H160 280 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 SYNDIG1Q9H7V2 258 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 HMG20AQ9NP66 347 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 FGF20Q9NP95 211 aaPredicted RBP3.06□□□□□ -1.92
CLK1-209ENST00000472679 STARD10Q9Y365 291 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 RFNGQ9Y644 331 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 CAMTA1Q9Y6Y1 1673 aa3.06□□□□□ -1.92
CLK1-209ENST00000472679 PLA2R1Q13018 1463 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 SERPINE3A8MV23 424 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 VAMP5O95183 116 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 TSPAN13O95857 204 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 CHMLP26374 656 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 GDI1P31150 447 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 NSG1P42857 185 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 ARG2P78540 354 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 RABL6Q3YEC7 729 aaPredicted RBP3.05□□□□□ -1.92
CLK1-209ENST00000472679 PRMT9Q6P2P2 845 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 ZNF880Q6PDB4 577 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 SASS6Q6UVJ0 657 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 FBXW12Q6X9E4 464 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 SHISA6Q6ZSJ9 500 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 HMGN2P46Q86SG4 172 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 LIX1Q8N485 282 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 FBXL13Q8NEE6 735 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 ZNF461Q8TAF7 563 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 DUS3LQ96G46 650 aaKnown RBP3.05□□□□□ -1.92
CLK1-209ENST00000472679 ZNF2Q9BSG1 426 aaPredicted RBP3.05□□□□□ -1.92
CLK1-209ENST00000472679 SAV1Q9H4B6 383 aaPredicted RBP3.05□□□□□ -1.92
CLK1-209ENST00000472679 WFDC1Q9HC57 220 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 PSMC3IPQ9P2W1 217 aaPredicted RBP3.05□□□□□ -1.92
CLK1-209ENST00000472679 GGA2Q9UJY4 613 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 TMEM14AQ9Y6G1 99 aa3.05□□□□□ -1.92
CLK1-209ENST00000472679 COL1A2P08123 1366 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 IGLV1-50A0A075B6I6 118 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 SGK1O00141 431 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 CDC7O00311 574 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 LINC00869P0C866 280 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 ACTR3P61158 418 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 VPS26BQ4G0F5 336 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 TMEM205Q6UW68 189 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 NECAB1Q8N987 351 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 ZNF502Q8TBZ5 544 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 SLC7A13Q8TCU3 470 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 GPR151Q8TDV0 419 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 LINC00477Q96M19 166 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 SLC2A8Q9NY64 477 aa3.04□□□□□ -1.92
CLK1-209ENST00000472679 ADAMTS13Q76LX8 1427 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 IGLV2-18A0A075B6J9 118 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 RAD51BO15315 384 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 RBBP9O75884 186 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 NDUFB10O96000 172 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 TCN2P20062 427 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 RND2P52198 227 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 FAM78AQ5JUQ0 283 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 TMEM107Q6UX40 140 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 CDR2LQ86X02 465 aaPredicted RBP3.03□□□□□ -1.92
CLK1-209ENST00000472679 LGI3Q8N145 548 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 SPATA4Q8NEY3 305 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 OR5B3Q8NH48 314 aa3.03□□□□□ -1.92
CLK1-209ENST00000472679 KCNG3Q8TAE7 436 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms