RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 TMEM38BQ9NVV0 291 aa9.26□□□□□ -0.93
UBE2F-220ENST00000472479 CHCHD3Q9NX63 227 aaKnown RBP9.26□□□□□ -0.93
UBE2F-220ENST00000472479 TPRKBQ9Y3C4 175 aa9.26□□□□□ -0.93
UBE2F-220ENST00000472479 FAM208BQ5VWN6 2430 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 IGLV1-36A0A0B4J1U3 117 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 IRGMA1A4Y4 181 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 PTGES3LE9PB15 166 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 ZNF593O00488 134 aaPredicted RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 DENRO43583 198 aaKnown RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 WNT11O96014 354 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 ITGA5P08648 1049 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 NAA10P41227 235 aaPredicted RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 MTNR1AP48039 350 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 PCBD1P61457 104 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 CSNK2BP67870 215 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 MRPS34P82930 218 aaKnown RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 PLP2Q04941 152 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 TAF13Q15543 124 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 MEP1BQ16820 701 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 SLC36A2Q495M3 483 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 HIKESHIQ53FT3 197 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 TMEM154Q6P9G4 183 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 SHFQ7M4L6 423 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 GABRG1Q8N1C3 465 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 ZNF540Q8NDQ6 660 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 RNASE6Q93091 150 aaKnown RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 ZC3HAV1LQ96H79 300 aaKnown RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 CNN2Q99439 309 aaKnown RBP9.25□□□□□ -0.93
UBE2F-220ENST00000472479 NMNAT2Q9BZQ4 307 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 ACTR6Q9GZN1 396 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 POLE4Q9NR33 117 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 NDRG3Q9UGV2 375 aa9.25□□□□□ -0.93
UBE2F-220ENST00000472479 NBASA2RRP1 2371 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 A0A1W2PR80 420 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 CASKO14936 926 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 SELENOFO60613 162 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 APOL3O95236 402 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 RAB36O95755 333 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 AGAP20933 346 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 ENTPD1P49961 510 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 TUBA1BP68363 451 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 TUBA4AP68366 448 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 EFNB1P98172 346 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 POU4F2Q12837 409 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 TMED1Q13445 227 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 GABRA6Q16445 453 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 SMN1Q16637 294 aaKnown RBP9.24□□□□□ -0.93
UBE2F-220ENST00000472479 TBRG1Q3YBR2 411 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 SLC25A30Q5SVS4 291 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 C6orf141Q5SZD1 244 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 UGT2A3Q6UWM9 527 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 USP51Q70EK9 711 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 TUBA1AQ71U36 451 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 LINC00346Q8IVM7 164 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 SKA3Q8IX90 412 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 CCDC36Q8IYA8 594 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 ALDH16A1Q8IZ83 802 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 STX19Q8N4C7 294 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 OR10H4Q8NGA5 316 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 OR52N5Q8NH56 324 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 ZNRF4Q8WWF5 429 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 ITLN2Q8WWU7 325 aaPredicted RBP9.24□□□□□ -0.93
UBE2F-220ENST00000472479 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
UBE2F-220ENST00000472479 TBX5Q99593 518 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
UBE2F-220ENST00000472479 MED18Q9BUE0 208 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 C1QTNF6Q9BXI9 259 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 CCDC90BQ9GZT6 254 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 CENPMQ9NSP4 180 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 LAMP5Q9UJQ1 280 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 BLOC1S6Q9UL45 172 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 UGT2A1Q9Y4X1 527 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 LRRC42Q9Y546 428 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 PCDHGB1Q9Y5G3 927 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 MYO7BQ6PIF6 2116 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 MED12LQ86YW9 2145 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 KALRNO60229 2985 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 BSNQ9UPA5 3926 aa9.24□□□□□ -0.93
UBE2F-220ENST00000472479 IQCMA0A1B0GVH7 501 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 E9PQ18 207 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 ZNF670-ZNF695F2Z2N8 137 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 UBL3O95164 117 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 FADS2O95864 444 aaKnown RBP9.23□□□□□ -0.93
UBE2F-220ENST00000472479 HLA-HP01893 362 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 TFP02787 698 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 CST2P09228 141 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 PATE4P0C8F1 98 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 DBTP11182 482 aaKnown RBP9.23□□□□□ -0.93
UBE2F-220ENST00000472479 PSMB1P20618 241 aaKnown RBP9.23□□□□□ -0.93
UBE2F-220ENST00000472479 UGT2B10P36537 528 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 ARR3P36575 388 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 ZNF133P52736 654 aaPredicted RBP9.23□□□□□ -0.93
UBE2F-220ENST00000472479 LSM6P62312 80 aaKnown RBP9.23□□□□□ -0.93
UBE2F-220ENST00000472479 RAB1AP62820 205 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 SCRN3Q0VDG4 424 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 EIF2B1Q14232 305 aaKnown RBP9.23□□□□□ -0.93
UBE2F-220ENST00000472479 FAM27BQ5VT28 67 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 SLC18B1Q6NT16 456 aa9.23□□□□□ -0.93
UBE2F-220ENST00000472479 CORO6Q6QEF8 472 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms