RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PRRX1P54821 245 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 UGT2B15P54855 530 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 AIF1P55008 147 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 CDH4P55283 916 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 FBXW4P57775 412 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 SEC61GP60059 68 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 FLI1Q01543 452 aaPredicted RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 GPM6BQ13491 265 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 GK3PQ14409 553 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 TAF7Q15545 349 aaPredicted RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 SMUG1Q53HV7 270 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 PHYHD1Q5SRE7 291 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 PMF1Q6P1K2 205 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 UNQ9165/PRO28630Q6UXU0 137 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 SLC25A48Q6ZT89 311 aaKnown RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 EFL1Q7Z2Z2 1120 aaKnown RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 PSTKQ8IV42 348 aaKnown RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 CEP112Q8N8E3 955 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 HSD17B11Q8NBQ5 300 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 SDR9C7Q8NEX9 313 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 PLEKHA8Q96JA3 519 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 SH3GL1Q99961 368 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 KCTD14Q9BQ13 255 aaPredicted RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 GON7Q9BXV9 100 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 RPF2Q9H7B2 306 aaKnown RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 ZNF639Q9UID6 485 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 PIGLQ9Y2B2 252 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 N6AMT1Q9Y5N5 214 aa1.38□□□□□ -2.19
RBM39-228ENST00000471635 MRPS18BQ9Y676 258 aaKnown RBP1.38□□□□□ -2.19
RBM39-228ENST00000471635 ARPC4-TTLL3A0A0A6YYG9 625 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 TRAV39A0A0B4J263 110 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 SPECC1L-ADORA2AF8WAN1 911 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 DNASE2O00115 360 aaPredicted RBP1.37□□□□□ -2.19
RBM39-228ENST00000471635 EIF3GO75821 320 aaKnown RBP eCLIP1.37□□□□□ -2.19
RBM39-228ENST00000471635 IGHDP01880 384 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 C2P06681 752 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 ZNF806P0C7X5 589 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 ATP1B2P14415 290 aaPredicted RBP1.37□□□□□ -2.19
RBM39-228ENST00000471635 AK4P27144 223 aaPredicted RBP1.37□□□□□ -2.19
RBM39-228ENST00000471635 HRH1P35367 487 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 SERPINB5P36952 375 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 ARFIP1P53367 373 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 ARG2P78540 354 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 IL24Q13007 206 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 CHIT1Q13231 466 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 PRPSAP1Q14558 356 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 ARHGAP19Q14CB8 494 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 SAXO2Q658L1 398 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 SPECC1LQ69YQ0 1117 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 DNAJC24Q6P3W2 148 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 CEMP1Q6PRD7 247 aaPredicted RBP1.37□□□□□ -2.19
RBM39-228ENST00000471635 H2BFWTQ7Z2G1 175 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 TMEM104Q8NE00 496 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 OR4F6Q8NGB9 312 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 OR8J1Q8NGP2 316 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 OR1L6Q8NGR2 347 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 OR4S2Q8NH73 311 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 ABHD3Q8WU67 409 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 TRIM44Q96DX7 344 aaPredicted RBP1.37□□□□□ -2.19
RBM39-228ENST00000471635 TCEANC2Q96MN5 208 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 NPY6RQ99463 290 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 SH3GL3Q99963 347 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 TCHPQ9BT92 498 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 FBXO6Q9NRD1 293 aaPredicted RBP1.37□□□□□ -2.19
RBM39-228ENST00000471635 CTNNA3Q9UI47 895 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 PEX16Q9Y5Y5 336 aa1.37□□□□□ -2.19
RBM39-228ENST00000471635 A0A0B4J2A0 478 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 A0A1B0GW55 424 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 A0A1W2PNN7 141 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 CLRN2A0PK11 232 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 BTBD17A6NE02 478 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 UBXN8O00124 270 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 SURF6O75683 361 aaKnown RBP1.36□□□□□ -2.19
RBM39-228ENST00000471635 RP2O75695 350 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 ERLIN2O94905 339 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 PTMAP06454 111 aaKnown RBP1.36□□□□□ -2.19
RBM39-228ENST00000471635 DUX4L2P0CJ85 424 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 DUX4L3P0CJ86 424 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 DUX4L5P0CJ88 424 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 DUX4L6P0CJ89 424 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 DUX4L7P0CJ90 424 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 CDKN2BP42772 138 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 CEBPDP49716 269 aaPredicted RBP1.36□□□□□ -2.19
RBM39-228ENST00000471635 HNMTP50135 292 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 GBX2P52951 348 aaPredicted RBP1.36□□□□□ -2.19
RBM39-228ENST00000471635 RABL6Q3YEC7 729 aaPredicted RBP1.36□□□□□ -2.19
RBM39-228ENST00000471635 C6orf226Q5I0X4 101 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 ZFP1Q6P2D0 407 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 LRRC74BQ6ZQY2 392 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 TMEM179Q6ZVK1 233 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 ABHD13Q7L211 337 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 PEX26Q7Z412 305 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 PPP1R42Q7Z4L9 355 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 TMEM135Q86UB9 458 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 COQ8AQ8NI60 647 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 LINC01560Q8TB33 94 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 LKAAEAR1Q8TD35 194 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 RSPH1Q8WYR4 309 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 P2RX4Q99571 388 aa1.36□□□□□ -2.19
RBM39-228ENST00000471635 CWH43Q9H720 699 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms