RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-205ENST00000466897 FAM169BQ8N8A8 192 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 WDR31Q8NA23 367 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 ZNRF4Q8WWF5 429 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 RFKQ969G6 155 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 ZNF184Q99676 751 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-205ENST00000466897 ANKRD60Q9BZ19 345 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 MED20Q9H944 212 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 SEC61A2Q9H9S3 476 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 HAO2Q9NYQ3 351 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 ZNF224Q9NZL3 707 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 NDRG3Q9UGV2 375 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 RAB26Q9ULW5 256 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 SLC25A15Q9Y619 301 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 CCDC182A6NF36 153 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 SNTNA6NMZ2 147 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 UBL3O95164 117 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 WNT11O96014 354 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 HTR1FP30939 366 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 UBE2NP61088 152 aaKnown RBP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 ISL1P61371 349 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 PCBD1P61457 104 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 MAD2L1BPQ15013 274 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 PCK2Q16822 640 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 C3orf36Q3SXR2 165 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 SLC36A2Q495M3 483 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 HIKESHIQ53FT3 197 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 TEX30Q5JUR7 227 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 MEPCEQ7L2J0 689 aaKnown RBP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 SKA3Q8IX90 412 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 DMRTC2Q8IXT2 367 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 BBS1Q8NFJ9 593 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 OR6K6Q8NGW6 343 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 FBLIM1Q8WUP2 373 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 C11orf40Q8WZ69 217 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 UBE2FQ969M7 185 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 OTULINQ96BN8 352 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 MUCL1Q96DR8 90 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 Q96MT0 163 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 DACH2Q96NX9 599 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 TEAD3Q99594 435 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 OR51V1Q9H2C8 321 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 RERGLQ9H628 205 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 B3GNT2Q9NY97 397 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 H2AFY2Q9P0M6 372 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
NPHP4-205ENST00000466897 COMMD3-BMI1R4GMX3 469 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 LRRK2Q5S007 2527 aa13.28□□□□□ -0.28
NPHP4-205ENST00000466897 A0A096LPE4 126 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 A0A1W2PPZ6 126 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 SH3D21A4FU49 640 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 TUBAL3A6NHL2 446 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 C12orf71A8MTZ7 269 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 C19orf84I3L1E1 186 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 SEC14L2O76054 403 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 CLDN1O95832 211 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 CLIC3O95833 236 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 TFP02787 698 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 GNAO1P09471 354 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 CDH11P55287 796 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 AQP6Q13520 282 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 APOFQ13790 326 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 ENDOGQ14249 297 aaKnown RBP13.27□□□□□ -0.29
NPHP4-205ENST00000466897 PPA1Q15181 289 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 TAB1Q15750 504 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 SGCAQ16586 387 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 KLHL12Q53G59 568 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 C6orf52Q5T4I8 152 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 SEZ6L2Q6UXD5 910 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 TIGD4Q8IY51 512 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF582Q96NG8 517 aaPredicted RBP13.27□□□□□ -0.29
NPHP4-205ENST00000466897 SPOCK3Q9BQ16 436 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 ZNF416Q9BWM5 594 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 KCNN2Q9H2S1 579 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 MRPL22Q9NWU5 206 aaKnown RBP13.27□□□□□ -0.29
NPHP4-205ENST00000466897 CRNNQ9UBG3 495 aaPredicted RBP13.27□□□□□ -0.29
NPHP4-205ENST00000466897 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.29
NPHP4-205ENST00000466897 FAM171A2A8MVW0 826 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 PRSS44E7EML9 344 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 GOSR1O95249 250 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 MPZL1O95297 269 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 IGKV3-15P01624 115 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 HLA-DQA2P01906 255 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 SCG5P05408 212 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 MMP7P09237 267 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-205ENST00000466897 EPXP11678 715 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 MYF6P23409 242 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 GSTT1P30711 240 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 ARR3P36575 388 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 ENTPD1P49961 510 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 IL5RAQ01344 420 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 POU4F2Q12837 409 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 GSG1Q2KHT4 349 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 THAP5Q7Z6K1 395 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 ANKHD1Q8IWZ3 2542 aaKnown RBP13.26□□□□□ -0.29
NPHP4-205ENST00000466897 OR10H5Q8NGA6 315 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 OR51L1Q8NGJ5 315 aa13.26□□□□□ -0.29
NPHP4-205ENST00000466897 FAM222BQ8WU58 562 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms