RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SPEF1Q9Y4P9 236 aa11.15□□□□□ -0.62
XRN1-203ENST00000463916 HIVEP2P31629 2446 aa11.15□□□□□ -0.62
XRN1-203ENST00000463916 SONP18583 2426 aaKnown RBP11.15□□□□□ -0.62
XRN1-203ENST00000463916 CUBNO60494 3623 aa11.15□□□□□ -0.62
XRN1-203ENST00000463916 LOC100509620A0A075B734 347 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 A0A1W2PPL8 197 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 OR10H3O60404 316 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 ADRA2AP08913 450 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 NR2C1P13056 603 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 CDKN2AP42771 156 aaKnown RBP11.15□□□□□ -0.63
XRN1-203ENST00000463916 MAGEA2P43356 314 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 KRR1Q13601 381 aaKnown RBP11.15□□□□□ -0.63
XRN1-203ENST00000463916 LCN8Q6JVE9 175 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 SMARCD3Q6STE5 483 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 DPY19L2P2Q6ZN68 376 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 TRPM8Q7Z2W7 1104 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 DHFR2Q86XF0 187 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.63
XRN1-203ENST00000463916 ZNF416Q9BWM5 594 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 WNT5BQ9H1J7 359 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 C1orf21Q9H246 121 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 SYT4Q9H2B2 425 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 EMC7Q9NPA0 242 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 SLC7A8Q9UHI5 535 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 LYVE1Q9Y5Y7 322 aa11.15□□□□□ -0.63
XRN1-203ENST00000463916 ANK3Q12955 4377 aaKnown RBP11.14□□□□□ -0.63
XRN1-203ENST00000463916 IQCMA0A1B0GVH7 501 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 XKRYO14609 159 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 MPZL1O95297 269 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 PPP1R3DO95685 299 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 SNAP29O95721 258 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 CST2P09228 141 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 FPR3P25089 353 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 STOMP27105 288 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 GSSP48637 474 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 HMGA2P52926 109 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 UCP2P55851 309 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 DSCR9P59020 149 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 HSF2Q03933 536 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 PLP2Q04941 152 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 MAD2L1BPQ15013 274 aaPredicted RBP11.14□□□□□ -0.63
XRN1-203ENST00000463916 RFX4Q33E94 735 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 C1orf94Q6P1W5 598 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 PGBD2Q6P3X8 592 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 POM121L2Q96KW2 1035 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 TSSK2Q96PF2 358 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 BTBD10Q9BSF8 475 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 OR2H1Q9GZK4 316 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 KCNN2Q9H2S1 579 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 OR52D1Q9H346 318 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 TPK1Q9H3S4 243 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 CCNB1IP1Q9NPC3 277 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 POLE4Q9NR33 117 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 VNN3Q9NY84 501 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 DUSP13Q9UII6 198 aa11.14□□□□□ -0.63
XRN1-203ENST00000463916 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
XRN1-203ENST00000463916 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
XRN1-203ENST00000463916 INAFM1C9JVW0 142 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 DCTN6O00399 190 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 ACOT8O14734 319 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 UBOX5O94941 541 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 GPANK1O95872 356 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 TXNDC12O95881 172 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 CLPTM1O96005 669 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 CCNOP22674 350 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 WNT5AP41221 380 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 ALDH3B1P43353 468 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 EVX1P49640 407 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 TBC1D28Q2M2D7 210 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 GPR139Q6DWJ6 353 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 ZNF101Q8IZC7 436 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 OR9Q2Q8NGE9 314 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 FANK1Q8TC84 345 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 SAMD8Q96LT4 415 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 THTPAQ9BU02 230 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 RERGLQ9H628 205 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 KRCC1Q9NPI7 259 aaPredicted RBP11.13□□□□□ -0.63
XRN1-203ENST00000463916 VSX1Q9NZR4 365 aaPredicted RBP11.13□□□□□ -0.63
XRN1-203ENST00000463916 COA3Q9Y2R0 106 aaPredicted RBP11.13□□□□□ -0.63
XRN1-203ENST00000463916 AHCYL1O43865 530 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 SLC16A7O60669 478 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 PTHP01270 115 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 MSR1P21757 451 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 PCSK6P29122 969 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 ZNF770Q6IQ21 691 aaPredicted RBP11.13□□□□□ -0.63
XRN1-203ENST00000463916 ZNF774Q6NX45 483 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 ASB9Q96DX5 294 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 ERMAPQ96PL5 475 aaPredicted RBP11.13□□□□□ -0.63
XRN1-203ENST00000463916 RAB1BQ9H0U4 201 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 DYNLRB1Q9NP97 96 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 REV1Q9UBZ9 1251 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 TMCC3Q9ULS5 477 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 TIMM10BQ9Y5J6 103 aa11.13□□□□□ -0.63
XRN1-203ENST00000463916 FKBP7Q9Y680 259 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms