RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC36A2Q495M3 483 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 CLEC12AQ5QGZ9 265 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 C1orf146Q5VVC0 180 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 RPL13AP3Q6NVV1 102 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 PAQR4Q8N4S7 273 aaPredicted RBP15.3■□□□□ 0.04
VPS52-214ENST00000463486 NPEPL1Q8NDH3 523 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 OR4F15Q8NGB8 312 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 OR4Q3Q8NH05 313 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 OR4K13Q8NH42 304 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 TMEM171Q8WVE6 324 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 NMNAT3Q96T66 252 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 ZNF416Q9BWM5 594 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 CA10Q9NS85 328 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 POU2F3Q9UKI9 436 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 ZANQ9Y493 2812 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 EBAG9O00559 213 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 SLC16A7O60669 478 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 SMPD2O60906 423 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 RAB36O95755 333 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 ZNF32P17041 273 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 GSTM3P21266 225 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 PRKACGP22612 351 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 NR4A1P22736 598 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 APOBEC3AP31941 199 aaPredicted RBP15.29■□□□□ 0.04
VPS52-214ENST00000463486 PTH2RP49190 550 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 PSG4Q00888 419 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 COX10Q12887 443 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 MSMPQ1L6U9 139 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 SWI5Q1ZZU3 235 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 OR6V1Q8N148 313 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 MUC15Q8N387 334 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 LNX2Q8N448 690 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 FOXN4Q96NZ1 517 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 YY1AP1Q9H869 796 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 EMC7Q9NPA0 242 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 PDP1Q9P0J1 537 aaPredicted RBP15.29■□□□□ 0.04
VPS52-214ENST00000463486 FBXL3Q9UKT7 428 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 B9D1Q9UPM9 204 aa15.29■□□□□ 0.04
VPS52-214ENST00000463486 COA3Q9Y2R0 106 aaPredicted RBP15.29■□□□□ 0.04
VPS52-214ENST00000463486 ARFGEF3Q5TH69 2177 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 GNGT2O14610 69 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 KHDRBS3O75525 346 aaKnown RBP15.28■□□□□ 0.04
VPS52-214ENST00000463486 MPZL1O95297 269 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 SOX14O95416 240 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 GAAP10253 952 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 MSR1P21757 451 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 THBS4P35443 961 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 FABP6P51161 128 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 ADIPOQQ15848 244 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 ATP6AP1Q15904 470 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 KCNMB1Q16558 191 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 PABPC1L2AQ5JQF8 200 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 SLC35F1Q5T1Q4 408 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 OTPQ5XKR4 325 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 TMEM53Q6P2H8 277 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 LEG1Q6P5S2 330 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 ZBTB46Q86UZ6 589 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 LURAP1LQ8IV03 231 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 WFDC11Q8NEX6 87 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 WNT5BQ9H1J7 359 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 CBLN4Q9NTU7 201 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 FAIMQ9NVQ4 179 aa15.28■□□□□ 0.04
VPS52-214ENST00000463486 A0A1W2PPL8 197 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 TMEM129A0AVI4 362 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 GPANK1O95872 356 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 CCL2P13500 99 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 CDKN1AP38936 164 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 AGAP6Q5VW22 663 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 SHQ1Q6PI26 577 aaKnown RBP15.27■□□□□ 0.04
VPS52-214ENST00000463486 SYT9Q86SS6 491 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 GLB1L2Q8IW92 636 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 SLC30A7Q8NEW0 376 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 SDR9C7Q8NEX9 313 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 ZNRF4Q8WWF5 429 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 NRBF2Q96F24 287 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 PERPQ96FX8 193 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 POM121L2Q96KW2 1035 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 TSSK6Q9BXA6 273 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 OR2H1Q9GZK4 316 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 CXorf56Q9H5V9 222 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 ZNF442Q9H7R0 627 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 RNF121Q9H920 327 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 AP4S1Q9Y587 144 aa15.27■□□□□ 0.04
VPS52-214ENST00000463486 LOC100509620A0A075B734 347 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 NDUFS7O75251 213 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 DEAF1O75398 565 aaPredicted RBP15.26■□□□□ 0.03
VPS52-214ENST00000463486 TFP02787 698 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 OR4A8P0C604 315 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 APEX1P27695 318 aaKnown RBP15.26■□□□□ 0.03
VPS52-214ENST00000463486 CRABP1P29762 137 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 SERPINF1P36955 418 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 ACTR3P61158 418 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.26■□□□□ 0.03
VPS52-214ENST00000463486 DAG1Q14118 895 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 SLC36A3Q495N2 470 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 FAHD1Q6P587 224 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 PRSS57Q6UWY2 283 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 TGIF2LYQ8IUE0 185 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 FBXL14Q8N1E6 418 aa15.26■□□□□ 0.03
VPS52-214ENST00000463486 OR52L1Q8NGH7 329 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms