RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RBM4Q9BWF3 364 aaKnown RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 DERL2Q9GZP9 239 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 MYOZ1Q9NP98 299 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 SDR39U1Q9NRG7 319 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 MED11Q9P086 117 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 MGAT4BQ9UQ53 548 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 BIRC6Q9NR09 4857 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 NCF1BA6NI72 391 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 NCF1CA8MVU1 366 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 H0YIV9 168 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 GOLGA6L19H0YKK7 550 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 BLOC1S5-TXNDC5H3BN57 136 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 FOXE1O00358 373 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 SLC22A2O15244 555 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 CXCL13O43927 109 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 REM1O75628 298 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 SEMA3DO95025 777 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 TTC4O95801 387 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 PTMAP06454 111 aaKnown RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 NCF1P14598 390 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 ZNF17P17021 662 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 PGAM1P18669 254 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 IL32P24001 234 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 EDNRAP25101 427 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 MNDAP41218 407 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 OR3A2P47893 321 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 TAS2R39P59534 338 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 ACTG1P63261 375 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 PSPHP78330 225 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 ZNF239Q16600 458 aaKnown RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 SPANXN3Q5MJ09 141 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 STEAP4Q687X5 459 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 HIST2H2AA3Q6FI13 130 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 CAVIN1Q6NZI2 390 aaKnown RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 SLC48A1Q6P1K1 146 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 APOOLQ6UXV4 268 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 LRRC70Q7Z2Q7 622 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 TMEM139Q8IV31 216 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 GTPBP8Q8N3Z3 284 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 ZNF433Q8N7K0 673 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 MAPKAPK5-AS1Q8N8E1 139 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 ZDHHC22Q8N966 263 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 SNX31Q8N9S9 440 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 THAP8Q8NA92 274 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 OR52R1Q8NGF1 315 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 OR10V1Q8NGI7 309 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 OR2V1Q8NHB1 315 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 FCAMRQ8WWV6 532 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 FAM162AQ96A26 154 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 ZNF524Q96C55 264 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 CNRIP1Q96F85 164 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 CERS2Q96G23 380 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 WDR41Q9HAD4 459 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 FOLH1BQ9HBA9 442 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 POPDC3Q9HBV1 291 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 ESM1Q9NQ30 184 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 PRODH2Q9UF12 536 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 MCTS1Q9ULC4 181 aaKnown RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 ABCG2Q9UNQ0 655 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 SLC25A15Q9Y619 301 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 TET2Q6N021 2002 aaPredicted RBP4.04□□□□□ -1.76
COPS3-204ENST00000462236 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
COPS3-204ENST00000462236 SYCE3A1L190 88 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 LRP5LA4QPB2 252 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 ANKRD61A6NGH8 418 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 OR5H1A6NKK0 313 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 DUXAA6NLW8 204 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 IFITM10A6NMD0 228 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 PMS2P5A8MQ11 134 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 TNFSF11O14788 317 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 EFNA2O43921 213 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 NME6O75414 186 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 BANF1O75531 89 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 PSMG1O95456 288 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 STAMBPO95630 424 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 HSPA4LO95757 839 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 PLGP00747 810 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 IGHV4-59P01825 116 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 KRT14P02533 472 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 IGFBP1P08833 259 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 FRMD6-AS1P0C7T7 363 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 IRF2P14316 349 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 CD1DP15813 335 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 IGHV1-2P23083 117 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SHC1P29353 583 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 HSD17B3P37058 310 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SRP14P37108 136 aaKnown RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 GP5P40197 560 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 KHKP50053 298 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 FABP6P51161 128 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 RAP1GDS1P52306 607 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 DLK1P80370 383 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SLMAPQ14BN4 828 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 OR4D1Q15615 310 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 TRIP13Q15645 432 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 LTB4RQ15722 352 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 NPTX1Q15818 432 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SGCBQ16585 318 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms