RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 SNRNP25Q9BV90 132 aaKnown RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 FAIM2Q9BWQ8 316 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 NDEL1Q9GZM8 345 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 ING2Q9H160 280 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 STMN4Q9H169 189 aaPredicted RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 GBA3Q9H227 469 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 GANQ9H2C0 597 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 ARMC7Q9H6L4 198 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 DCLRE1BQ9H816 532 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 NHEJ1Q9H9Q4 299 aaPredicted RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 UGT1A8Q9HAW9 530 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 APMAPQ9HDC9 416 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 MRPS30Q9NP92 439 aaKnown RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 STARD5Q9NSY2 213 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 QPCTLQ9NXS2 382 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 ZNF226Q9NYT6 803 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 HMGXB4Q9UGU5 601 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 PCSK1NQ9UHG2 260 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 BOKQ9UMX3 212 aaPredicted RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 ENTPD4Q9Y227 616 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 EIF3LQ9Y262 564 aaKnown RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 TDRKHQ9Y2W6 561 aaKnown RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 UTP11Q9Y3A2 253 aaKnown RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 MMACHCQ9Y4U1 282 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 OR51B4Q9Y5P0 310 aa1.88□□□□□ -2.11
COL21A1-205ENST00000461489 SPTBN5Q9NRC6 3674 aaKnown RBP1.88□□□□□ -2.11
COL21A1-205ENST00000461489 A0A0J9YVX5 310 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 IGHV5-10-1A0A0J9YXX1 117 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 GOLGA6L7A0A1B0GV03 622 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 A6NDX4 124 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 DHRS7CA6NNS2 312 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 H3BNH8 94 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 RAD51BO15315 384 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 HMGB3O15347 200 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 EIF3HO15372 352 aaKnown RBP eCLIP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 TRAF3IP2O43734 574 aaPredicted RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CST8O60676 142 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 MED6O75586 246 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 POP7O75817 140 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ZMPSTE24O75844 475 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 NSA2O95478 260 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 IFNB1P01574 187 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 P04436 131 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SERPINA7P05543 415 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 MPC1LP0DKB6 136 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ZNF24P17028 368 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 TSPAN8P19075 237 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 TPSB2P20231 275 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 HNF1AP20823 631 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CD9P21926 228 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 HIST1H1TP22492 207 aaPredicted RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ME2P23368 584 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 RPS3P23396 243 aaKnown RBP eCLIP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 KDELR1P24390 212 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 HTR1EP28566 365 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ALDH3A1P30838 453 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 IFNA8P32881 189 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SLC26A3P40879 764 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CYB561P49447 251 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CCR8P51685 355 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 HSD17B7P56937 341 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 EIF3EP60228 445 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ATP6V0D1P61421 351 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CCL7P80098 99 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 BASP1P80723 227 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 OTUD4Q01804 1114 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 STX4Q12846 297 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 C1orf61Q13536 156 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 MESDQ14696 234 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 TRIP10Q15642 601 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 TPSAB1Q15661 275 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 NSDHLQ15738 373 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ZSWIM7Q19AV6 140 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 FAM83EQ2M2I3 478 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 DEFB109BQ30KR1 87 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SLC25A35Q3KQZ1 300 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 MLIPQ5VWP3 458 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 TMEM215Q68D42 235 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 OR5M10Q6IEU7 315 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 FAM45BPQ6NSW5 357 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 FAM173BQ6P4H8 233 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SHQ1Q6PI26 577 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SPESP1Q6UW49 350 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ENPP6Q6UWR7 440 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 RBM43Q6ZSC3 357 aaKnown RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CENPUQ71F23 418 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 NDUFAF7Q7L592 441 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 DENND4AQ7Z401 1863 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 BNIPLQ7Z465 357 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 ABHD12BQ7Z5M8 362 aaPredicted RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SLC26A11Q86WA9 606 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 C17orf82Q86X59 251 aaPredicted RBP1.87□□□□□ -2.11
COL21A1-205ENST00000461489 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SAXO1Q8IYX7 474 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SLC25A45Q8N413 288 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 CSNK1A1LQ8N752 337 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 Q8N9W7 124 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 SUMF2Q8NBJ7 301 aa1.87□□□□□ -2.11
COL21A1-205ENST00000461489 OR2L8Q8NGY9 312 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms