RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ZNF691Q5VV52 312 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CLEC18BQ6UXF7 455 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 B3GLCTQ6Y288 498 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 TMPPEQ6ZT21 453 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CISD2Q8N5K1 135 aaKnown RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 TCEANCQ8N8B7 351 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 LRRC75AQ8NAA5 344 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CYB561A3Q8NBI2 242 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CLEC18CQ8NCF0 446 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ZPLD1Q8TCW7 415 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RFT1Q96AA3 541 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RASD2Q96D21 266 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 KATNB1Q9BVA0 655 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ANKRD60Q9BZ19 345 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HDHD2Q9H0R4 259 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MED20Q9H944 212 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 KRCC1Q9NPI7 259 aaPredicted RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 IER3IP1Q9Y5U9 82 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP39-210ENST00000459775 H7C1C5 153 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 PLPP3O14495 311 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RNF13O43567 381 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HCN1O60741 890 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CCNKO75909 580 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HIST1H2ABP04908 130 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ACADSP16219 412 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ZNF17P17021 662 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CDH2P19022 906 aaPredicted RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 NUDT6P53370 316 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 CLDN18P56856 261 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 LCN6P62502 163 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MYBPC1Q00872 1141 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MED21Q13503 144 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ALG10Q5BKT4 473 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RIPPLY2Q5TAB7 128 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ATPAF1Q5TC12 328 aaPredicted RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 LIPNQ5VXI9 398 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 SLX4IPQ5VYV7 408 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 TTC23Q5W5X9 447 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 SLC27A4Q6P1M0 643 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HIST3H2AQ7L7L0 130 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 OVCH2Q7RTZ1 564 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 GPAT4Q86UL3 456 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 OR5J2Q8NH18 312 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 OR4K13Q8NH42 304 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 OR10D3Q8NH80 312 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MFSD8Q8NHS3 518 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 C9orf43Q8TAL5 461 aaPredicted RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 APH1BQ8WW43 257 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 OSTF1Q92882 214 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HIST1H2ACQ93077 130 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 OTULINQ96BN8 352 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 NMD3Q96D46 503 aaKnown RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 TXNDC15Q96J42 360 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 MAP6Q96JE9 813 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 Q96M85 177 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 RDH12Q96NR8 316 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ERMAPQ96PL5 475 aaPredicted RBP9.2□□□□□ -0.94
USP39-210ENST00000459775 PITX2Q99697 317 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 TIMP4Q99727 224 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 HCAR1Q9BXC0 346 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 SLC25A18Q9H1K4 315 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 FN3KQ9H479 309 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 FKRPQ9H9S5 495 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 ZNF229Q9UJW7 825 aa9.2□□□□□ -0.94
USP39-210ENST00000459775 TRGV5A0A0B4J1U4 118 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 ACOT7O00154 380 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 TLX2O43763 284 aaPredicted RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 XPNPEP2O43895 674 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 NDUFB2O95178 105 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 CRYGCP07315 174 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 MYF6P23409 242 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 CTXN1P60606 82 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 MELKQ14680 651 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 PGGHGQ32M88 737 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 OTPQ5XKR4 325 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 C12orf73Q69YU5 71 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 HBMQ6B0K9 141 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 C5orf46Q6UWT4 87 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 SIAH3Q8IW03 269 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 C8orf59Q8N0T1 100 aaPredicted RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 OR5M9Q8NGP3 310 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 NEIL3Q8TAT5 605 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 MIB2Q96AX9 1013 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 ADGRG7Q96K78 797 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 EMC6Q9BV81 110 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 TAPBPLQ9BX59 468 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 OPA3Q9H6K4 179 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 UNKLQ9H9P5 680 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 MED29Q9NX70 200 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 ALKBH4Q9NXW9 302 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 DNAJC27Q9NZQ0 273 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 B3GAT1Q9P2W7 334 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 ZNF346Q9UL40 294 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 HIF3AQ9Y2N7 669 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 MRPS18CQ9Y3D5 142 aaKnown RBP9.19□□□□□ -0.94
USP39-210ENST00000459775 ALPK2Q86TB3 2170 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 TEX13CA0A0J9YWL9 993 aa9.19□□□□□ -0.94
USP39-210ENST00000459775 A0A1B0GTH9 108 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms