RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 VENTXO95231 258 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 MMP7P09237 267 aaPredicted RBP13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 ZNF250P15622 560 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 GCH1P30793 250 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 GDI2P50395 445 aaKnown RBP13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 DVL1P1P54792 670 aaPredicted RBP13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 CTXN1P60606 82 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 RPL27P61353 136 aaKnown RBP13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 LIPEQ05469 1076 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 TRAM2Q15035 370 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 MOGQ16653 247 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 PCGF3Q3KNV8 242 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 SPATA46Q5T0L3 261 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 UNQ6126/PRO20091Q6UXV3 157 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 FKBP9P1Q75LS8 142 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 VTCN1Q7Z7D3 282 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 OR51A7Q8NH64 312 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 AKR7LQ8NHP1 331 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 GEMIN6Q8WXD5 167 aaKnown RBP13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 ALG12Q9BV10 488 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 NSRP1Q9H0G5 558 aaKnown RBP13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 DECR2Q9NUI1 292 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 CMTM6Q9NX76 183 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 TREM2Q9NZC2 230 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
CHCHD3-204ENST00000457942 TGP01266 2768 aa13.46□□□□□ -0.26
CHCHD3-204ENST00000457942 IGKV1D-43A0A0B4J1Z2 117 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 EFCAB9A8MZ26 197 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 J3KTA2 159 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 CXCR6O00574 342 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 TFP02787 698 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 EGR1P18146 543 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 SLC7A2P52569 658 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF133P52736 654 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 TMEM33P57088 247 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 MRPS11P82912 194 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 TEKQ02763 1124 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 TSTQ16762 297 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 THEM4Q5T1C6 240 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 AVPI1Q5T686 147 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 OAFQ86UD1 273 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 ALDH16A1Q8IZ83 802 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 CLDN22Q8N7P3 220 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 CPEB3Q8NE35 698 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 RP9Q8TA86 221 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 FNDC8Q8TC99 324 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 NABP1Q96AH0 204 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 GMPR2Q9P2T1 348 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 GRIP1Q9Y3R0 1128 aa13.45□□□□□ -0.26
CHCHD3-204ENST00000457942 IGLV3-9A0A075B6K5 115 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 PLSCR5A0PG75 271 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 HTR3EA5X5Y0 456 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 A6NIZ1 184 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 TSPAN19P0C672 248 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 COX4I1P13073 169 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 MAKP20794 623 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 LAP3P28838 519 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 RPL4P36578 427 aaKnown RBP13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 GPR4P46093 362 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 RAP1BP61224 184 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 RAP1AP62834 184 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 MVKQ03426 396 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF718Q3SXZ3 478 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 SLC25A47Q6Q0C1 308 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 USP51Q70EK9 711 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 RRM2BQ7LG56 351 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 CPLX4Q7Z7G2 160 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 CYP4Z1Q86W10 505 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 TREML1Q86YW5 311 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 OR13C2Q8NGS9 318 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 OR51F2Q8NH61 342 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 ABHD4Q8TB40 342 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 GTF3AQ92664 365 aaKnown RBP13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 FAM162AQ96A26 154 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 HSH2DQ96JZ2 352 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 NDEL1Q9GZM8 345 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 SAP30LQ9HAJ7 183 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 HIF1ANQ9NWT6 349 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 SNX13Q9Y5W8 968 aa13.44□□□□□ -0.26
CHCHD3-204ENST00000457942 DYSFO75923 2080 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 PKD1L1Q8TDX9 2849 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 FAM157AC9JC47 383 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 H7C1C5 153 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 XKRYO14609 159 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 WNT9BO14905 357 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 CCDC22O60826 627 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 RP2O75695 350 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 SERPINA1P01009 418 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 IGHMP01871 453 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 MSMBP08118 114 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 GAAP10253 952 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 SLC9A3P48764 834 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 NUDT2P50583 147 aa13.43□□□□□ -0.26
CHCHD3-204ENST00000457942 ZNF81P51508 661 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms