RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SRP9P49458 86 aaKnown RBP12.22□□□□□ -0.45
CLK3-203ENST00000454830 ASAH1Q13510 395 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 SGCAQ16586 387 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 OR2AJ1Q8NGZ0 328 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 C4orf45Q96LM5 186 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 DMRTB1Q96MA1 342 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 ABHD1Q96SE0 405 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 BEX2Q9BXY8 128 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 ABRACLQ9P1F3 81 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 PLA2G10O15496 165 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 CD2P06729 351 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 RFC3P40938 356 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 CD97P48960 835 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 PPP1R32Q7Z5V6 425 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 WDFY1Q8IWB7 410 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 PRSS35Q8N3Z0 413 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 IL22RA1Q8N6P7 574 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 OR52N5Q8NH56 324 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 THOC3Q96J01 351 aaKnown RBP12.22□□□□□ -0.45
CLK3-203ENST00000454830 FOXJ2Q9P0K8 574 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 MRPS18BQ9Y676 258 aaKnown RBP12.22□□□□□ -0.45
CLK3-203ENST00000454830 TNRC6BQ9UPQ9 1833 aaKnown RBP12.22□□□□□ -0.45
CLK3-203ENST00000454830 IFITM5A6NNB3 132 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 ABHD16AO95870 558 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 PNPP00491 289 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 ITGA3P26006 1051 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 RBMS1P29558 406 aaKnown RBP12.21□□□□□ -0.45
CLK3-203ENST00000454830 GNALP38405 381 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 MFGE8Q08431 387 aaPredicted RBP12.21□□□□□ -0.45
CLK3-203ENST00000454830 ZNF684Q5T5D7 378 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 TEX19Q8NA77 164 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 C11orf40Q8WZ69 217 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 MAP6Q96JE9 813 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 FRMD6Q96NE9 622 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 OR2M5A3KFT3 312 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 ZNF814B7Z6K7 855 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 NPIPA2E9PIF3 369 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 NPIPA3F8WFD2 350 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 TLX3O43711 291 aaPredicted RBP12.21□□□□□ -0.45
CLK3-203ENST00000454830 WDPCPO95876 746 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 MT-CO3P00414 261 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 IGHEP01854 428 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 GAAP10253 952 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 SDHBP21912 280 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 KIR2DL3P43628 341 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 MLF1P58340 268 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 PYHIN1Q6K0P9 492 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 TOMM5Q8N4H5 51 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 TMEM9BQ9NQ34 198 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 STMN3Q9NZ72 180 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 MYEF2Q9P2K5 600 aaKnown RBP12.21□□□□□ -0.45
CLK3-203ENST00000454830 CKLFQ9UBR5 152 aa12.21□□□□□ -0.45
CLK3-203ENST00000454830 TRAV8-7A0A075B6U6 113 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 MEIOCA2RUB1 952 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 H0YC42 278 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 LANCL1O43813 399 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 ICAM2P13598 275 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 CD59P13987 128 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 KIR3DL2P43630 455 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 GALK2Q01415 458 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 MRPL28Q13084 256 aaKnown RBP12.21□□□□□ -0.46
CLK3-203ENST00000454830 TIGD3Q6B0B8 471 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 GLB1L2Q8IW92 636 aa12.21□□□□□ -0.46
CLK3-203ENST00000454830 SLC25A43Q8WUT9 341 aaPredicted RBP12.21□□□□□ -0.46
CLK3-203ENST00000454830 CENPXA8MT69 81 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SLC43A1O75387 559 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 HSD11B1P28845 292 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SLC35A1P78382 337 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 DGCR2P98153 550 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 HYAL4Q2M3T9 481 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 AGAP6Q5VW22 663 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 TMPPEQ6ZT21 453 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 IL17RDQ8NFM7 739 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 AGAP4Q96P64 663 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 KCNK17Q96T54 332 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 NKIRAS2Q9NYR9 191 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 POU2F3Q9UKI9 436 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 PCDHGA5Q9Y5G8 931 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 WDFY3Q8IZQ1 3526 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 CYC1P08574 325 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SLC2A1P11166 492 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 MAP2K6P52564 334 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 ACER2Q5QJU3 275 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 CMTM4Q8IZR5 234 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 OR13C3Q8NGS6 347 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SFXN2Q96NB2 322 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 SPATA2Q9UM82 520 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 COL5A1P20908 1838 aaPredicted RBP12.2□□□□□ -0.46
CLK3-203ENST00000454830 TRAV6A0A075B6T7 132 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 DCDC2BA2VCK2 349 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 TNFSF11O14788 317 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 ZNF432O94892 652 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 QDPRP09417 244 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 ZP4Q12836 540 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 HES3Q5TGS1 186 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms