RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 LAMP3Q9UQV4 416 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 AP4S1Q9Y587 144 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 ABCA2Q9BZC7 2435 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 JMJD1CQ15652 2540 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 BHLHE40O14503 412 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 TP53P04637 393 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-202ENST00000452372 SOD3P08294 240 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 MMP7P09237 267 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-202ENST00000452372 HIST1H1CP16403 213 aaKnown RBP17.29■□□□□ 0.36
COL9A3-202ENST00000452372 NOS3P29474 1203 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 CALCRP30988 508 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 ARHGDIAP52565 204 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 CLEC12AQ5QGZ9 265 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 Q71RC1 249 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-202ENST00000452372 LRRC75A-AS1Q8N1F1 130 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 OR8D4Q8NGM9 314 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 OR4K13Q8NH42 304 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 TMEM171Q8WVE6 324 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 NRBF2Q96F24 287 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 MS4A3Q96HJ5 214 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 NUAK2Q9H093 628 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 RNF121Q9H920 327 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 FAIMQ9NVQ4 179 aa17.29■□□□□ 0.36
COL9A3-202ENST00000452372 IGHV2OR16-5A0A0B4J2B6 119 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 A0A1W2PPL8 197 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 SLC16A7O60669 478 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 KHDRBS3O75525 346 aaKnown RBP17.28■□□□□ 0.36
COL9A3-202ENST00000452372 SERPINA5P05154 406 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 IGFBP1P08833 259 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-202ENST00000452372 CST2P09228 141 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 INHBBP09529 407 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 LAP3P28838 519 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 TTKP33981 857 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 RAB39AQ14964 217 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 ZNF544Q6NX49 715 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 LEG1Q6P5S2 330 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 JAZF1Q86VZ6 243 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 ZNF584Q8IVC4 421 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 CIARTQ8N365 385 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-202ENST00000452372 OR4F15Q8NGB8 312 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 NMNAT3Q96T66 252 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 TSSK6Q9BXA6 273 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 GRIP2Q9C0E4 1043 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 POLE4Q9NR33 117 aa17.28■□□□□ 0.36
COL9A3-202ENST00000452372 RENP00797 406 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 ANXA8P13928 327 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 MSR1P21757 451 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 FASP25445 335 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 CRABP1P29762 137 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 APOBEC3AP31941 199 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-202ENST00000452372 ACTR3P61158 418 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 HGFACQ04756 655 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 ATP6AP1Q15904 470 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 SLC35F1Q5T1Q4 408 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 SHQ1Q6PI26 577 aaKnown RBP17.27■□□□□ 0.36
COL9A3-202ENST00000452372 DTX2Q86UW9 622 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 HS3ST5Q8IZT8 346 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 LNX2Q8N448 690 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 FBXO17Q96EF6 278 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 TBC1D23Q9NUY8 699 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 REV1Q9UBZ9 1251 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 BAIAP2Q9UQB8 552 aa17.27■□□□□ 0.36
COL9A3-202ENST00000452372 COA3Q9Y2R0 106 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-202ENST00000452372 SMPD2O60906 423 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 SOX14O95416 240 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 CD8AP01732 235 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 SCG5P05408 212 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF35P13682 527 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF32P17041 273 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 PRKACGP22612 351 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 FABP6P51161 128 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 PCBD1P61457 104 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 PLP2Q04941 152 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL9A3-202ENST00000452372 Q5PR19 223 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF362Q5T0B9 420 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-202ENST00000452372 AGAP6Q5VW22 663 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 DNM1P34Q6PK57 102 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 SYT9Q86SS6 491 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 GLB1L2Q8IW92 636 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 FBXL14Q8N1E6 418 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 MUC15Q8N387 334 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 NPEPL1Q8NDH3 523 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 NUP37Q8NFH4 326 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 OR52E2Q8NGJ4 325 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 TSSK2Q96PF2 358 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 DDOQ99489 341 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 WACQ9BTA9 647 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 BDH2Q9BUT1 245 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 TRAF4Q9BUZ4 470 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-202ENST00000452372 C1orf198Q9H425 327 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 CXorf56Q9H5V9 222 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 RERGLQ9H628 205 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF556Q9HAH1 456 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 SRA1Q9HD15 236 aaKnown RBP17.26■□□□□ 0.35
COL9A3-202ENST00000452372 CCNB1IP1Q9NPC3 277 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 B9D1Q9UPM9 204 aa17.26■□□□□ 0.35
COL9A3-202ENST00000452372 OR6C68A6NDL8 312 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 OVOL3O00110 214 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 DCTN6O00399 190 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms