RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 THBS1P07996 1170 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ERP29P30040 261 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 RPUSD3Q6P087 351 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 UNQ9370/PRO34162Q6UXP9 181 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZFP62Q8NB50 900 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR2V1Q8NHB1 315 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ROBO4Q8WZ75 1007 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 HGDQ93099 445 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 RPS10-NUDT3A0A1W2PQS6 291 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR2M5A3KFT3 312 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CENPXA8MT69 81 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 LEUTXA8MZ59 168 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 XKRYO14609 159 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 FARS2O95363 451 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ONECUT2O95948 504 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CELA3AP09093 270 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 BMP7P18075 431 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CCNOP22674 350 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 MST1P26927 711 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CA7P43166 264 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZP1P60852 638 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 GGTLC2Q14390 218 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 NDUFAF6Q330K2 333 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ARMC4Q5T2S8 1044 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 LCN1P1Q5VSP4 162 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CREB3L2Q70SY1 520 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNRF4Q8WWF5 429 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 YIPF5Q969M3 257 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC41A3Q96GZ6 507 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CCDC120Q96HB5 630 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 HDHD5Q9BXW7 423 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 BEX2Q9BXY8 128 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 TRIM2Q9C040 744 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC23A1Q9UHI7 598 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 SIGLEC7Q9Y286 467 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 DTX4Q9Y2E6 619 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ARID1AO14497 2285 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CPSF4LA6NMK7 179 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 BLOC1S5-TXNDC5H3BN57 136 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 TGFBR3LH3BV60 316 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 TNFSF11O14788 317 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 OGG1O15527 345 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 EIF4E2O60573 245 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 FMO6PO60774 539 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CEACAM4O75871 244 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CDH11P55287 796 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 TLE4Q04727 773 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF791Q3KP31 576 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ALG10BQ5I7T1 473 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 C3orf33Q6P1S2 294 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 NANOGNBQ7Z5D8 188 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR5W2Q8NH69 310 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 SDF2Q99470 211 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 EXOSC4Q9NPD3 245 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 FBXO34Q9NWN3 711 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 CLDN16Q9Y5I7 305 aa6.6□□□□□ -1.35
CDC42BPA-208ENST00000442054 ADAMTS20P59510 1910 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 DMDP11532 3685 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 A0A087WZY1 265 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 LINC00862A6NCI5 91 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 SMLR1H3BR10 107 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 SHOXO15266 292 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 RGS5O15539 181 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 GSTZ1O43708 216 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 RFPL3SP0C7P2 107 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC2A2P11168 524 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 NAT2P11245 290 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 S1PR1P21453 382 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 GPR4P46093 362 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR10A3P58181 314 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 PLP2Q04941 152 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 FAM27D1Q5T7N8 215 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 TMPPEQ6ZT21 453 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 MEPCEQ7L2J0 689 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 AAED1Q7RTV5 226 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 NRMQ8IXM6 262 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 PFN4Q8NHR9 129 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 AP3S1Q92572 193 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 APH1AQ96BI3 265 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 KCTD12Q96CX2 325 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ARSGQ96EG1 525 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CMC2Q9NRP2 79 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 BABAM2Q9NXR7 383 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 EIF3KQ9UBQ5 218 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 FBXL2Q9UKC9 423 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 LOC105371267A0A1B0GV96 52 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CDHR4A6H8M9 788 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 NKX2-6A6NCS4 301 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CD8B2A6NJW9 211 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CDK2AP1O14519 115 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CTDSPLO15194 276 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR2T1O43869 369 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 RGS9O75916 674 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 KRT8P05787 483 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 TSPAN19P0C672 248 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 CD8BP10966 210 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 TACR3P29371 465 aa6.59□□□□□ -1.35
CDC42BPA-208ENST00000442054 ATP6V1E1P36543 226 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms