RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 CDRT4Q8N9R6 151 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 ZNF610Q8N9Z0 462 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 SLC24A4Q8NFF2 622 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 KBTBD8Q8NFY9 601 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 RBPMSQ93062 196 aaKnown RBP5.35□□□□□ -1.55
PTPRR-204ENST00000440835 ZBED6CLQ96FA7 236 aaPredicted RBP5.35□□□□□ -1.55
PTPRR-204ENST00000440835 CPPED1Q9BRF8 314 aaPredicted RBP5.35□□□□□ -1.55
PTPRR-204ENST00000440835 PRRG4Q9BZD6 226 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 TBL1XR1Q9BZK7 514 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 MCUBQ9NWR8 336 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 KLHL28Q9NXS3 571 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 SCN3BQ9NY72 215 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 VNN3Q9NY84 501 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 TAS2R3Q9NYW6 316 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 DNAJB9Q9UBS3 223 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 MGAT4BQ9UQ53 548 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 ZNF337Q9Y3M9 751 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 GMPPBQ9Y5P6 360 aa5.35□□□□□ -1.55
PTPRR-204ENST00000440835 A0A1W2PRB8 838 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CD5LO43866 347 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 KIAA0513O60268 411 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 NKX2-2O95096 273 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 EFNA1P20827 205 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 GALP22466 123 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 FKBP2P26885 142 aaKnown RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CHI3L1P36222 383 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 NUP62P37198 522 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 MAP3K8P41279 467 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CLDN15P56746 228 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CXCR4P61073 352 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CHRNB3Q05901 458 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 IL18R1Q13478 541 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 PON3Q15166 354 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 GRK1Q15835 563 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SGCBQ16585 318 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SGCAQ16586 387 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 ARMCX4Q5H9R4 360 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 THEM4Q5T1C6 240 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 BHLHB9Q6PI77 547 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 GALNT10Q86SR1 603 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 OR6M1Q8NGM8 313 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 OR9A2Q8NGT5 310 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 OR2V1Q8NHB1 315 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 APH1BQ8WW43 257 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 OR5P2Q8WZ92 322 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CPNE4Q96A23 557 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 MOAP1Q96BY2 351 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 ADGRG7Q96K78 797 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 ZNF416Q9BWM5 594 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 POTEKPQ9BYX7 375 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 BARHL1Q9BZE3 327 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 GPR61Q9BZJ8 451 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 OPN3Q9H1Y3 402 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 RIBC2Q9H4K1 309 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SMURF1Q9HCE7 757 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 ACSS1Q9NUB1 689 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 RPS6KA6Q9UK32 745 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 RNF115Q9Y4L5 304 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 NAV3Q8IVL0 2385 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 TRAV20A0A0B4J274 112 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 A0A1W2PS29 197 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CLIC1O00299 241 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CSF3P09919 207 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 LAMP1P11279 417 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 GGT1P19440 569 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 UQCRC2P22695 453 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SOAT1P35610 550 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 WNT5AP41221 380 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 TGM4P49221 684 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 CCT3P49368 545 aaKnown RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 ZNF41P51814 821 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 MTPNP58546 118 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 MADCAM1Q13477 382 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 DOC2BQ14184 412 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 MAD2L1BPQ15013 274 aaPredicted RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 LARS2Q15031 903 aaKnown RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SPDYE7PQ495Y7 208 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SAPCD1Q5SSQ6 148 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SAXO2Q658L1 398 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 STAC2Q6ZMT1 411 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 HDDC2Q7Z4H3 204 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SERPINA11Q86U17 422 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 GGNQ86UU5 652 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SVOPLQ8N434 492 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 OR7G2Q8NG99 324 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 TMEM158Q8WZ71 300 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 ELP4Q96EB1 424 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 SGTBQ96EQ0 304 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 PERPQ96FX8 193 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 THUMPD1Q9NXG2 353 aaKnown RBP5.34□□□□□ -1.55
PTPRR-204ENST00000440835 VAPAQ9P0L0 249 aa5.34□□□□□ -1.55
PTPRR-204ENST00000440835 TRBV5-3A0A0A0MS03 114 aa5.33□□□□□ -1.56
PTPRR-204ENST00000440835 F8W036 122 aa5.33□□□□□ -1.56
PTPRR-204ENST00000440835 CXCR6O00574 342 aa5.33□□□□□ -1.56
PTPRR-204ENST00000440835 GNGT2O14610 69 aa5.33□□□□□ -1.56
PTPRR-204ENST00000440835 FABP7O15540 132 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms