RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ARR3P36575 388 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 POLR2IP36954 125 aaKnown RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ZNF83P51522 516 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 RAD23AP54725 363 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 NR1H2P55055 460 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 TLE4Q04727 773 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 TRIP10Q15642 601 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 SGCAQ16586 387 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 GSG1Q2KHT4 349 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ALKBH2Q6NS38 261 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ZBTB49Q6ZSB9 765 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 SLC16A14Q7RTX9 510 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 MDP1Q86V88 176 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 SLC26A10Q8NG04 563 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 OR9Q1Q8NGQ5 310 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 OR2T4Q8NH00 348 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ZNRF4Q8WWF5 429 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 PLPPR2Q96GM1 343 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 FOXN4Q96NZ1 517 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 HCAR1Q9BXC0 346 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 RIBC2Q9H4K1 309 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 SEC61A2Q9H9S3 476 aa12.53□□□□□ -0.4
CSTF3-202ENST00000431742 SRA1Q9HD15 236 aaKnown RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
CSTF3-202ENST00000431742 RTTNQ86VV8 2226 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 IGHV1-18A0A0C4DH31 117 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 FAM183AA6NL82 134 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.41
CSTF3-202ENST00000431742 PATE4P0C8F1 98 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 ZNF14P17017 642 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-202ENST00000431742 SPI1P17947 270 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 CD40P25942 277 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 CAPZA2P47755 286 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 PTDSS1P48651 473 aaKnown RBP12.52□□□□□ -0.41
CSTF3-202ENST00000431742 EFNB1P98172 346 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 GLO1Q04760 184 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 SLC36A2Q495M3 483 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 OGFRL1Q5TC84 451 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-202ENST00000431742 UGT2A3Q6UWM9 527 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 LRRC18Q8N456 261 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 FBXO17Q96EF6 278 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 PIK3IP1Q96FE7 263 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 SLC38A2Q96QD8 506 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 MBOAT4Q96T53 435 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 C1QTNF6Q9BXI9 259 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 TEX12Q9BXU0 123 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 GRIP2Q9C0E4 1043 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 RERGLQ9H628 205 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 RNPEPL1Q9HAU8 725 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 EMC7Q9NPA0 242 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 HINT3Q9NQE9 182 aaKnown RBP12.52□□□□□ -0.41
CSTF3-202ENST00000431742 C8orf4Q9NR00 106 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 ORC6Q9Y5N6 252 aa12.52□□□□□ -0.41
CSTF3-202ENST00000431742 POLQO75417 2590 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 M0R1B8 84 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 DLGAP1O14490 977 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PRKYO43930 277 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 MPZL1O95297 269 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 GPANK1O95872 356 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 TFP02787 698 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 GYPBP06028 91 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 CELA3BP08861 270 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 CECR9P0C854 216 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 CLUP10909 449 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 CD79AP11912 226 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 ZNF32P17041 273 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PTAFRP25105 342 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PYCR1P32322 319 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 GUCA1AP43080 201 aaPredicted RBP12.51□□□□□ -0.41
CSTF3-202ENST00000431742 IDH3GP51553 393 aaPredicted RBP12.51□□□□□ -0.41
CSTF3-202ENST00000431742 LSM6P62312 80 aaKnown RBP12.51□□□□□ -0.41
CSTF3-202ENST00000431742 RAB1AP62820 205 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 HSF2Q03933 536 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PIGFQ07326 219 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 SNAPC1Q16533 368 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 LPCAT4Q643R3 524 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 SYT9Q86SS6 491 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 ZNF584Q8IVC4 421 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PACRGLQ8N7B6 248 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PROKR2Q8NFJ6 384 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 PTP4A1Q93096 173 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 HRASLS5Q96KN8 279 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 RDH12Q96NR8 316 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 WACQ9BTA9 647 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 TOR3AQ9H497 397 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 MED20Q9H944 212 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 MRPL22Q9NWU5 206 aaKnown RBP12.51□□□□□ -0.41
CSTF3-202ENST00000431742 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 FBXL3Q9UKT7 428 aa12.51□□□□□ -0.41
CSTF3-202ENST00000431742 RNF115Q9Y4L5 304 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms