RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PINLYPA6NC86 204 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ARRDC5A6NEK1 342 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 AP3D1O14617 1153 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 TP53I11O14683 189 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 CLOCKO15516 846 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF264O43296 627 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 XPNPEP2O43895 674 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 EFNA2O43921 213 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ZIC3O60481 467 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 TIPRLO75663 272 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SLC25A12O75746 678 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ATP6V1G2O95670 118 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PMS2P2O95744 297 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 CSTAP01040 98 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 IFNW1P05000 195 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 TSPAN19P0C672 248 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 UBL4AP11441 157 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ANPEPP15144 967 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SLC1A3P43003 542 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ERFP50548 548 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 P2RX1P51575 399 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 B3GALT5-AS1P59052 145 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PPP2R2BQ00005 443 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 CHRNB3Q05901 458 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 C17orf67Q0P5P2 114 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 IL13RA2Q14627 380 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 TOMM34Q15785 309 aaPredicted RBP4.81□□□□□ -1.64
C9orf3-205ENST00000427193 NDUFAF6Q330K2 333 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 FAM98BQ52LJ0 330 aaKnown RBP4.81□□□□□ -1.64
C9orf3-205ENST00000427193 OGFRL1Q5TC84 451 aaPredicted RBP4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SLC22A10Q63ZE4 541 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SPINK14Q6IE38 97 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 OR2T5Q6IEZ7 315 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 FAHD1Q6P587 224 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF613Q6PF04 617 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 IL20RBQ6UXL0 311 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ZDHHC21Q8IVQ6 265 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 CYP4Z2PQ8N1L4 340 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ATG16L2Q8NAA4 619 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 OR2T29Q8NH02 315 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 OR5W2Q8NH69 310 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ADAMTS16Q8TE57 1224 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 DUSP19Q8WTR2 217 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 LIPHQ8WWY8 451 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PROX1Q92786 737 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SLC38A4Q969I6 547 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PNPLA2Q96AD5 504 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SLC47A1Q96FL8 570 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PRRC1Q96M27 445 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SEPHS2Q99611 448 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PIP5K1AQ99755 562 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 OSBPL11Q9BXB4 747 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 GABARAPL1Q9H0R8 117 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 GPR83Q9NYM4 423 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 OR6C3Q9NZP0 311 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 C6orf203Q9P0P8 240 aaPredicted RBP4.81□□□□□ -1.64
C9orf3-205ENST00000427193 NLKQ9UBE8 527 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 SLC9A8Q9Y2E8 581 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 ADAM18Q9Y3Q7 739 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 CSAG2Q9Y5P2 127 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 CACNA1CQ13936 2221 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 TLN2Q9Y4G6 2542 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PRRC2AP48634 2157 aaKnown RBP4.81□□□□□ -1.64
C9orf3-205ENST00000427193 PCNX3Q9H6A9 2034 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 AKAP6Q13023 2319 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 A0A087WUJ7 227 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 A0A087WUU8 490 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TRBV4-1A0A0J9YWV2 114 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 A0A1B0GWA3 101 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SH3PXD2BA1X283 911 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 FTCDNL1E5RQL4 147 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 H0Y3Z8 333 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 hCG_2039718K7EN88 272 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 HCRTR2O43614 444 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CHP2O43745 196 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 HS6ST1O60243 411 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ZG16O60844 167 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 GMNNO75496 209 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 DIRAS1O95057 198 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 MT-ND1P03886 318 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 FABP3P05413 133 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 HPNP05981 417 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 UBTFL6P0CB48 400 aaPredicted RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 GKN3PP0CG01 181 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 COX6B1P14854 86 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ITGA2P17301 1181 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CNR1P21554 472 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CBLP22681 906 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 FASP25445 335 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 IL12BP29460 328 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SLC6A8P48029 635 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CENPAP49450 140 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CCL11P51671 97 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 IST1P53990 364 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CTBP2P56545 445 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 RGS8P57771 180 aaPredicted RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 HOXC5Q00444 222 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms