RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 KDM6AO15550 1401 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 RREB1Q92766 1687 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 IGLV3-16A0A075B6K0 115 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 C11orf94C9JXX5 98 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 KRTAP4-16G5E9R7 235 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 CCL21O00585 134 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 XKRYO14609 159 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 GOSR2O14653 212 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 SLC31A2O15432 143 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 DFNA5O60443 496 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ICOSLGO75144 302 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 CIB2O75838 187 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 TMEM50AO95807 157 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PCCAP05165 728 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 FGF1P05230 155 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 HOXC4P09017 264 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 TDGF1P13385 188 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ADRB3P13945 408 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 HNRNPH3P31942 346 aaKnown RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 CASP14P31944 242 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 NMUP48645 174 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 LHX2P50458 406 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 TDGF1P3P51864 188 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ATP5IP56385 69 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ACTR3P61158 418 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 KCNJ2P63252 427 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ACTA1P68133 377 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 MECOMQ03112 1051 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 LRRC63Q05C16 580 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 BST1Q10588 318 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 GK3PQ14409 553 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ARHGAP19Q14CB8 494 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PPP1R7Q15435 360 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 SSX2Q16385 188 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 SGCAQ16586 387 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 RABL6Q3YEC7 729 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PIGGQ5H8A4 983 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PIANPQ8IYJ0 282 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF786Q8N393 782 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ZADH2Q8N4Q0 377 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF557Q8N988 423 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 MDS2Q8NDY4 140 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 VN1R2Q8NFZ6 395 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 NPBQ8NG41 125 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 OR4F6Q8NGB9 312 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 OR9K2Q8NGE7 335 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 OR2G3Q8NGZ4 309 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 AKR7LQ8NHP1 331 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 GEMIN6Q8WXD5 167 aaKnown RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 NT5C3BQ969T7 300 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 RNF185Q96GF1 192 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 OSBPL10Q9BXB5 764 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 TMEM59Q9BXS4 323 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PKIBQ9C010 78 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 CDC42EP4Q9H3Q1 356 aaKnown RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 METTL7AQ9H8H3 244 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 TM9SF3Q9HD45 589 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 SLCO1B3Q9NPD5 702 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 SLC2A8Q9NY64 477 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PSMC3IPQ9P2W1 217 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 XCL2Q9UBD3 114 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PACSIN2Q9UNF0 486 aaPredicted RBP1.59□□□□□ -2.15
PTPRC-208ENST00000427110 TP53TG5Q9Y2B4 290 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 MYH2Q9UKX2 1941 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 MYH13Q9UKX3 1938 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 PHLPP1O60346 1717 aa1.59□□□□□ -2.16
PTPRC-208ENST00000427110 KIAA1551Q9HCM1 1747 aa1.59□□□□□ -2.16
PTPRC-208ENST00000427110 MEGF6O75095 1541 aa1.59□□□□□ -2.16
PTPRC-208ENST00000427110 RAD50Q92878 1312 aa1.59□□□□□ -2.16
PTPRC-208ENST00000427110 ECM29Q5VYK3 1845 aa1.59□□□□□ -2.16
PTPRC-208ENST00000427110 CCDC88AQ3V6T2 1871 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 TNS3Q68CZ2 1445 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 RAI1Q7Z5J4 1906 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 C4AP0C0L4 1744 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 C4BP0C0L5 1744 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 COL5A3P25940 1745 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 COL14A1Q05707 1796 aaKnown RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 BCORQ6W2J9 1755 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 DLEC1Q9Y238 1755 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 KCPQ6ZWJ8 1503 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 IGHV3-64DA0A0J9YX35 117 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 PRSS37A4D1T9 235 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 FAM47DPA6NHR8 397 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 H0Y8G0 127 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 SUPT3HO75486 399 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 PALMO75781 387 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 C1orf105O95561 183 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 IGHV2-5P01817 119 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 IGKV5-2P06315 115 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 SLC2A3P11169 496 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 AK4P27144 223 aaPredicted RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 HOXA9P31269 272 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 LONP1P36776 959 aaKnown RBP1.58□□□□□ -2.16
PTPRC-208ENST00000427110 NPBWR2P48146 333 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 UBE2AP49459 152 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 SULT1E1P49888 294 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 RORCP51449 518 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 CCR8P51685 355 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 UGT2B15P54855 530 aa1.58□□□□□ -2.16
PTPRC-208ENST00000427110 FBXW4P57775 412 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms