RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MROQ9BYG7 248 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 WDR12Q9GZL7 423 aaKnown RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.252e-23■■■□□ 15.6
ACTB-204ENST00000425660 PPIL3Q9H2H8 161 aaKnown RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PALMDQ9NP74 551 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 TIGARQ9NQ88 270 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 SLCO1C1Q9NYB5 712 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PLEKHB1Q9UF11 243 aaPredicted RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 IKZF2Q9UKS7 526 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PEX16Q9Y5Y5 336 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 FRYQ5TBA9 3013 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 FAM166BA8MTA8 275 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 CXCL13O43927 109 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 GATBO75879 557 aaKnown RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 FREM3P0C091 2139 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 BMP4P12644 408 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ZNF708P17019 499 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 EIF1AXP47813 144 aaKnown RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 CLDN18P56856 261 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PLGLB1Q02325 96 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ALKBH1Q13686 389 aaKnown RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 ZNF846Q147U1 533 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 BCL2A1Q16548 175 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ACSM3Q53FZ2 586 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 YIF1BQ5BJH7 314 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PDSS1Q5T2R2 415 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 OTPQ5XKR4 325 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PAMR1Q6UXH9 720 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 LRRC69Q6ZNQ3 347 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 SLC22A16Q86VW1 577 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 UBQLNLQ8IYU4 475 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PHYHIPQ92561 330 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 NSMAFQ92636 917 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 TMEM54Q969K7 222 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 FAM122AQ96E09 287 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 GLTPQ9NZD2 209 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 FRRS1LQ9P0K9 344 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 CYB5R1Q9UHQ9 305 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 FOXD3Q9UJU5 478 aaPredicted RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 RCE1Q9Y256 329 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ZNF281Q9Y2X9 895 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 CASKO14936 926 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 EFSO43281 561 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 QDPRP09417 244 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 CLEC2LP0C7M8 214 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 SPINK2P20155 84 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 ETV6P41212 452 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 PPIAP62937 165 aaKnown RBP13.49□□□□□ -0.25
ACTB-204ENST00000425660 HNRNPA0Q13151 305 aaKnown RBP13.49□□□□□ -0.25
ACTB-204ENST00000425660 EIF2B1Q14232 305 aaKnown RBP13.49□□□□□ -0.25
ACTB-204ENST00000425660 KCNMB1Q16558 191 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 ZMAT1Q5H9K5 638 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 C10orf128Q5T292 105 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 LRRN1Q6UXK5 716 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 UNQ9370/PRO34162Q6UXP9 181 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 CEACAM19Q7Z692 300 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 FAM109AQ8N4B1 249 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 OR2G2Q8NGZ5 317 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 C11orf40Q8WZ69 217 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 INTS12Q96CB8 462 aaKnown RBP13.49□□□□□ -0.25
ACTB-204ENST00000425660 SLC24A3Q9HC58 644 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 FLVCR1Q9Y5Y0 555 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 KCNMB2Q9Y691 235 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 AKAP13Q12802 2813 aa13.49□□□□□ -0.25
ACTB-204ENST00000425660 CYTIPO60759 359 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 TMCC2O75069 709 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 RPP14O95059 124 aaKnown RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 CALRP27797 417 aaKnown RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 S100A5P33763 92 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 CARD17Q5XLA6 110 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 RHOUQ7L0Q8 258 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 TPRA1Q86W33 373 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 OR13C5Q8NGS8 318 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 SLC6A15Q9H2J7 730 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 ZDHHC11Q9H8X9 412 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 ELOVL3Q9HB03 270 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 TRAV1-2A0A0B4J238 106 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 OR4C45A6NMZ5 311 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 ZNF254O75437 659 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 WNT11O96014 354 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 UCHL1P09936 223 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 CSNK1A1P48729 337 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 CCR9P51686 369 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 DEFB109BQ30KR1 87 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 FAM27D1Q5T7N8 215 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 FOXL2NBQ6ZUU3 175 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 DCXRQ7Z4W1 244 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 RNF133Q8WVZ7 376 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 RGP1Q92546 391 aaPredicted RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 AP3S1Q92572 193 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms