RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CRLF2Q9HC73 371 aa9.13□□□□□ -0.95
MDC1-205ENST00000425072 GPR35Q9HC97 309 aa9.13□□□□□ -0.95
MDC1-205ENST00000425072 ACOT13Q9NPJ3 140 aa9.13□□□□□ -0.95
MDC1-205ENST00000425072 ERVK13-1Q9NX77 482 aa9.13□□□□□ -0.95
MDC1-205ENST00000425072 LAMP5Q9UJQ1 280 aa9.13□□□□□ -0.95
MDC1-205ENST00000425072 CLEC4AQ9UMR7 237 aa9.13□□□□□ -0.95
MDC1-205ENST00000425072 A0A1W2PPL8 197 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 TVP23AA6NH52 213 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 HSPB2A8KAH6 182 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 ZNF99A8MXY4 864 aaPredicted RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 UPK3AO75631 287 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 TFAP2AP05549 437 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 MRPL3P09001 348 aaKnown RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 TMIGD3P0DMS9 266 aaPredicted RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 OR8G3PP0DMU2 310 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 CTSSP25774 331 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 CEACAM8P31997 349 aaPredicted RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 OPRM1P35372 400 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 SH3BGRP55822 239 aaPredicted RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 PCBD1P61457 104 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 ACTA2P62736 377 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 ACTG2P63267 376 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 ADAM8P78325 824 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 ROR2Q01974 943 aaKnown RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 FMODQ06828 376 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 EGR3Q06889 387 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 PIGFQ07326 219 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 MRPL28Q13084 256 aaKnown RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 IRF3Q14653 427 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 SPHARQ15513 63 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 TBCEQ15813 527 aaPredicted RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 HSPB2Q16082 182 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 PCK2Q16822 640 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 TSPO2Q5TGU0 170 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 FAM27BQ5VT28 67 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 SLC18B1Q6NT16 456 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 DPY19L4Q7Z388 723 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 NUFIP2Q7Z417 695 aaKnown RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 DPPA2Q7Z7J5 298 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 SYT9Q86SS6 491 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 CNEP1R1Q8N9A8 125 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 C9orf106Q8NAJ2 232 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 GJC3Q8NFK1 279 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 SLC26A10Q8NG04 563 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 OR52N1Q8NH53 320 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 OTOSQ8NHW6 89 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 THEM6Q8WUY1 208 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 C11orf40Q8WZ69 217 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 DOCK7Q96N67 2140 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 BBC3Q96PG8 261 aaPredicted RBP9.12□□□□□ -0.95
MDC1-205ENST00000425072 TTYH2Q9BSA4 534 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 ISYNA1Q9NPH2 558 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 SLC7A10Q9NS82 523 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 BABAM2Q9NXR7 383 aa9.12□□□□□ -0.95
MDC1-205ENST00000425072 A0A1W2PQL4 384 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 E9PLN8 166 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 ZNHIT1O43257 154 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 ZNF254O75437 659 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 SULT1C4O75897 302 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 IL18BPO95998 194 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 TFP02787 698 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 MT-ND5P03915 603 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 HTR1AP08908 422 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 SPARCP09486 303 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 LIMS3P0CW19 117 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 LIMS4P0CW20 117 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 SMIM18P0DKX4 95 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 GLI4P10075 376 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 ALOX5APP20292 161 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 MSR1P21757 451 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 PCMT1P22061 227 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 MPGP29372 298 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 NAA10P41227 235 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 KIR2DL2P43627 348 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 ETV1P50549 477 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 WNT4P56705 351 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 PMPCAQ10713 525 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 FAPQ12884 760 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 NFATC3Q12968 1075 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 GUSBP1Q15486 140 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 MED22Q15528 200 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 NEDD8Q15843 81 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 CEACAM16Q2WEN9 425 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 PHYHD1Q5SRE7 291 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 SYT6Q5T7P8 510 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 UBE2UQ5VVX9 321 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 RTL6Q6ICC9 239 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 DEGS2Q6QHC5 323 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 BEND4Q6ZU67 534 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 FOXL2NBQ6ZUU3 175 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 ZNF367Q7RTV3 350 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 CDC20BQ86Y33 519 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 WDFY1Q8IWB7 410 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 CCDC36Q8IYA8 594 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 SYS1Q8N2H4 156 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 OR6N2Q8NGY6 317 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 SGCDQ92629 289 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 COG8Q96MW5 612 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms