RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 B9D1Q9UPM9 204 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 PLEKHA6Q9Y2H5 1048 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 FKBP7Q9Y680 259 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 PRR14LQ5THK1 2151 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 IQCMA0A1B0GVH7 501 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 RIIAD1A6NNX1 92 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 CELA3BP08861 270 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF14P17017 642 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 GRK5P34947 590 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 DAPP51397 102 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 HSF2Q03933 536 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 SPOCK1Q08629 439 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 RAB39AQ14964 217 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 PGGHGQ32M88 737 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 DCHS2Q6V1P9 2916 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 SYT9Q86SS6 491 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 OR6V1Q8N148 313 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 OR4Q3Q8NH05 313 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 PIGTQ969N2 578 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF75AQ96N20 296 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 OSBPL10Q9BXB5 764 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 RACGAP1Q9H0H5 632 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 NOX3Q9HBY0 568 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 ENOPH1Q9UHY7 261 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 TIMM10BQ9Y5J6 103 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 FBN2P35556 2912 aa20.06■□□□□ 0.8
SMARCB1-205ENST00000417137 OR6C68A6NDL8 312 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 ATP6V1G2-DDX39BF2Z307 99 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 H3BNX3 289 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 HMGN1P05114 100 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 LSM6P62312 80 aaKnown RBP20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 GLO1Q04760 184 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 GINS1Q14691 196 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 ZBTB46Q86UZ6 589 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 ALDH16A1Q8IZ83 802 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 PARP8Q8N3A8 854 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 OR1J2Q8NGS2 313 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 OR2T4Q8NH00 348 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 SMAP2Q8WU79 429 aaPredicted RBP20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 NEUROG1Q92886 237 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 STMN2Q93045 179 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 TSSK2Q96PF2 358 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 PKP2Q99959 881 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 GABARAPL1Q9H0R8 117 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 S100A14Q9HCY8 104 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 KRT84Q9NSB2 600 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 SPEF1Q9Y4P9 236 aa20.05■□□□□ 0.8
SMARCB1-205ENST00000417137 VSTM5A8MXK1 200 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 TMCC2O75069 709 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 ATE1O95260 518 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 MMP7P09237 267 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF3P17036 446 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 ESRRGP62508 458 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF362Q5T0B9 420 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 SLC37A3Q8NCC5 494 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 ICA1LQ8NDH6 482 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 FBXO17Q96EF6 278 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 MS4A3Q96HJ5 214 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 CCL19Q99731 98 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 DHRS9Q9BPW9 319 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF416Q9BWM5 594 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 CMC2Q9NRP2 79 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 OAZ3Q9UMX2 235 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 APCP25054 2843 aa20.04■□□□□ 0.8
SMARCB1-205ENST00000417137 IGLV1-36A0A0B4J1U3 117 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 IGHV2OR16-5A0A0B4J2B6 119 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 E7EQL1 145 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF32P17041 273 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 CD53P19397 219 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 CRISP1P54107 249 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 CDK5Q00535 292 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 KCNMB1Q16558 191 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 PABPC1L2AQ5JQF8 200 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 ZNF544Q6NX49 715 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 CYB561A3Q8NBI2 242 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 MBD6Q96DN6 1003 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 FOXN4Q96NZ1 517 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 DDOQ99489 341 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 EMC7Q9NPA0 242 aa20.03■□□□□ 0.8
SMARCB1-205ENST00000417137 DCTN6O00399 190 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 HLA-DQA2P01906 255 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 SCG5P05408 212 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 PAICSP22234 425 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 CALCRP30988 508 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 APLNRP35414 380 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 FABP6P51161 128 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 GALK2Q01415 458 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 SCRN3Q0VDG4 424 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 CRMP1Q14194 572 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 ENDOGQ14249 297 aaKnown RBP20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 TBC1D28Q2M2D7 210 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 KDM4DQ6B0I6 523 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 MYPOPQ86VE0 399 aaPredicted RBP20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 FBXL14Q8N1E6 418 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 IQCF1Q8N6M8 205 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 SLC30A7Q8NEW0 376 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 PROKR2Q8NFJ6 384 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 OR10H5Q8NGA6 315 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 TMEM171Q8WVE6 324 aa20.02■□□□□ 0.8
SMARCB1-205ENST00000417137 C11orf40Q8WZ69 217 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms