RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR8J3Q8NGG0 315 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 AKR7LQ8NHP1 331 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 LRRC58Q96CX6 371 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 NMD3Q96D46 503 aaKnown RBP12.28□□□□□ -0.44
PAF1-202ENST00000416728 POM121L2Q96KW2 1035 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 TXNIPQ9H3M7 391 aa12.28□□□□□ -0.44
PAF1-202ENST00000416728 IGKV1D-43A0A0B4J1Z2 117 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 TRIM77I1YAP6 450 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 J3QLI3 93 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 AVPP01185 164 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 TSPAN19P0C672 248 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 MAKP20794 623 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 MPV17P39210 176 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 MMP15P51511 669 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 HILS1P60008 231 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 ERVK-25P63136 954 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 PSG4Q00888 419 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 TAF11Q15544 211 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 THEM4Q5T1C6 240 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 FAM27BQ5VT28 67 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 USP43Q70EL4 1123 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 SLC25A40Q8TBP6 338 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 IPCEF1Q8WWN9 437 aaPredicted RBP12.27□□□□□ -0.45
PAF1-202ENST00000416728 CCL17Q92583 94 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 MARS2Q96GW9 593 aaKnown RBP12.27□□□□□ -0.45
PAF1-202ENST00000416728 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 GAL3ST1Q99999 423 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 ALG12Q9BV10 488 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 TMPRSS13Q9BYE2 586 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 EGLN1Q9GZT9 426 aa12.27□□□□□ -0.45
PAF1-202ENST00000416728 LOC100509620A0A075B734 347 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 FXYD1O00168 92 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 IFNA8P32881 189 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 SLC3A1Q07837 685 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 LRRC23Q53EV4 343 aaPredicted RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 COQ5Q5HYK3 327 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 DCAF12L2Q5VW00 463 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 MBNL2Q5VZF2 373 aaKnown RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 SLC25A47Q6Q0C1 308 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 RFPL4BQ6ZWI9 263 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 C1QL2Q7Z5L3 287 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 ALDH16A1Q8IZ83 802 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 ABHD4Q8TB40 342 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 FNDC8Q8TC99 324 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 KLF14Q8TD94 323 aaPredicted RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 FAM216AQ8WUB2 273 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 GCDHQ92947 438 aaPredicted RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 RBP7Q96R05 134 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 TMEM120AQ9BXJ8 343 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 PLA2G12AQ9BZM1 189 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 OR2H1Q9GZK4 316 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 OR2J1Q9GZK6 312 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 CYSLTR2Q9NS75 346 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 MRGBPQ9NV56 204 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 CGGBP1Q9UFW8 167 aaPredicted RBP12.26□□□□□ -0.45
PAF1-202ENST00000416728 HIF3AQ9Y2N7 669 aa12.26□□□□□ -0.45
PAF1-202ENST00000416728 ISPDA4D126 451 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 HTR3EA5X5Y0 456 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 ZSCAN5BA6NJL1 495 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 BBIP1A8MTZ0 92 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 MRASO14807 208 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 PIP5K1CO60331 668 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 NPPAP01160 153 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 IFI30P13284 250 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 GATA3P23771 443 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 LAP3P28838 519 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 LIPAP38571 399 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 COMPP49747 757 aaPredicted RBP12.25□□□□□ -0.45
PAF1-202ENST00000416728 RPL27P61353 136 aaKnown RBP12.25□□□□□ -0.45
PAF1-202ENST00000416728 PCBD1P61457 104 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 PPP1CBP62140 327 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 ST3GAL3Q11203 375 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 CYBRD1Q53TN4 286 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 ZMAT1Q5H9K5 638 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 ZNF771Q7L3S4 317 aaPredicted RBP12.25□□□□□ -0.45
PAF1-202ENST00000416728 CLDN22Q8N7P3 220 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 NANPQ8TBE9 248 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 C10orf82Q8WW14 230 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 BPIFA2Q96DR5 249 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 TPD52L3Q96J77 140 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 ZNF583Q96ND8 569 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 RBM4Q9BWF3 364 aaKnown RBP12.25□□□□□ -0.45
PAF1-202ENST00000416728 SUCNR1Q9BXA5 334 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 WNT5BQ9H1J7 359 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 TIMM10BQ9Y5J6 103 aa12.25□□□□□ -0.45
PAF1-202ENST00000416728 H3BSA7 217 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 UBOX5O94941 541 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 IGHMP01871 453 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 ADH4P08319 380 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 CST2P09228 141 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 ADRA2CP18825 462 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 KDELR2P33947 212 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 LIMS1P48059 325 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 ARHGDIAP52565 204 aa12.24□□□□□ -0.45
PAF1-202ENST00000416728 ARFIP2P53365 341 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms