RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 DEFB106AQ8N104 65 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM86AQ8N2M4 240 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 LIX1Q8N485 282 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 STX19Q8N4C7 294 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 DNAJC22Q8N4W6 341 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TEX26Q8N6G2 289 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CLDN22Q8N7P3 220 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CYB561A3Q8NBI2 242 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 DUSP18Q8NEJ0 188 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR10H4Q8NGA5 316 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR9I1Q8NGQ6 314 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR2T29Q8NH02 315 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF128Q8TEB7 428 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HPSE2Q8WWQ2 592 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC7A6Q92536 515 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 MCHR2Q969V1 340 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ADIPOR1Q96A54 375 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RFT1Q96AA3 541 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CIDECQ96AQ7 238 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATXN7L3BQ96GX2 97 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF170Q96K19 258 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CASD1Q96PB1 797 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SEPHS2Q99611 448 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 C16orf70Q9BSU1 422 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 MED18Q9BUE0 208 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 FNDC11Q9BVV2 318 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HINT2Q9BX68 163 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 VN1R1Q9GZP7 353 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCDC90BQ9GZT6 254 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TUBB1Q9H4B7 451 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 DPEP3Q9H4B8 488 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 NXF3Q9H4D5 531 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CSNK1G1Q9HCP0 422 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB18Q9NP72 206 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ISYNA1Q9NPH2 558 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ABCB10Q9NRK6 738 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF701Q9NV72 531 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAS2R13Q9NYV9 303 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SEC14L3Q9UDX4 400 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR12D3Q9UGF7 316 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 GLS2Q9UI32 602 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 PSORS1C1Q9UIG5 152 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF150Q9ULK6 438 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 UBQLN1Q9UMX0 589 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 SAMHD1Q9Y3Z3 626 aaKnown RBP3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF115Q9Y4L5 304 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 HES2Q9Y543 173 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ASB4Q9Y574 426 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 NME7Q9Y5B8 376 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 GMPPBQ9Y5P6 360 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 CACNG2Q9Y698 323 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 ANK1P16157 1881 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 LOC285556D6RIA3 1793 aa3.17□□□□□ -1.9
HMGB3P23-201ENST00000414981 A0A0G2JMZ2 1700 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LRRC37A2A6NM11 1700 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 IGKV3D-20A0A0C4DH25 116 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LOC285095A0A1B0GVY8 99 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 IRGMA1A4Y4 181 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCDC182A6NF36 153 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ANKRD30BLA7E2S9 258 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 HEPACAM2A8MVW5 462 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 H7C423 109 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCRL2O00421 344 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CXCR6O00574 342 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 PIRO00625 290 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TFECO14948 347 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARPC3O15145 178 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 B4GAT1O43505 415 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 NOS1APO75052 506 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF780AO75290 641 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATP6AP2O75787 350 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC25A27O95847 323 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 WDPCPO95876 746 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 IFNA14P01570 189 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 IGLV3-25P01717 112 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 C9P02748 559 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SEMG1P04279 462 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FGF1P05230 155 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CA3P07451 260 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 GNSP15586 552 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF44P15621 663 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF30P17039 623 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 C4BPBP20851 252 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CNR1P21554 472 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCNOP22674 350 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CA6P23280 308 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RPS12P25398 132 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL12BP29460 328 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RCVRNP35243 200 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 GGT2P36268 569 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 KIR3DL2P43630 455 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LHX1P48742 406 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC9A3P48764 834 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RGS6P49758 472 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FHITP49789 147 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 PPT1P50897 306 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 GZMMP51124 257 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RORCP51449 518 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR4D2P58180 307 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 PRPS1P60891 318 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms