RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DMBX1Q8NFW5 382 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 OR4D9Q8NGE8 314 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 PIGTQ969N2 578 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 FAM173AQ9BQD7 235 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 JAM3Q9BX67 310 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 HAO2Q9NYQ3 351 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 NTNG1Q9Y2I2 539 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 GDNFP39905 211 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 CLDN12P56749 244 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 EIF2S3LQ2VIR3 472 aaKnown RBP15.75■□□□□ 0.11
PHRF1-202ENST00000413872 DTWD2Q8NBA8 298 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 OR2V1Q8NHB1 315 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 RPL3LQ92901 407 aaKnown RBP15.75■□□□□ 0.11
PHRF1-202ENST00000413872 KIRREL1Q96J84 757 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 PLCXD1Q9NUJ7 323 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 DRD3P35462 400 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 OR8G1Q15617 311 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 IDO2Q6ZQW0 420 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 EMG1Q92979 244 aaKnown RBP15.75■□□□□ 0.11
PHRF1-202ENST00000413872 CPNE4Q96A23 557 aaPredicted RBP15.75■□□□□ 0.11
PHRF1-202ENST00000413872 FAM117AQ9C073 453 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 OR11A1Q9GZK7 315 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 MED6O75586 246 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 NCR1O76036 304 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 SOD1P00441 154 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 IGHV3-9P01782 118 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 TFAP2AP05549 437 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 COL9A1P20849 921 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 ARRB2P32121 409 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 EGR3Q06889 387 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 MTFR2Q6P444 385 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 GLIPR1L1Q6UWM5 242 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 ASH2LQ9UBL3 628 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 KCNE1BA0A087WTH5 132 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 MEIOCA2RUB1 952 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 SLC22A20A6NK97 555 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 M0R296 226 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 GABARAPO95166 117 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 IL9P15248 144 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 HIST1H1CP16403 213 aaKnown RBP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 PTBP1P26599 531 aaKnown RBP eCLIP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 HOXD12P35452 270 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 TRIM64CA6NLI5 447 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 ZAR1LA6NP61 321 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 TNFSF14O43557 240 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 ZNF728P0DKX0 622 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 EDDM3BP56851 147 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 PAN3Q58A45 887 aaKnown RBP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 DEDD2Q8WXF8 326 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 H1FXQ92522 213 aaKnown RBP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 WDR34Q96EX3 536 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 COX14Q96I36 57 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 PRSS37A4D1T9 235 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 IFNA10P01566 189 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 HOXB5P09067 269 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 FAPQ12884 760 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 ZNF679Q8IYX0 411 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 DCLRE1CQ96SD1 692 aaKnown RBP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 SPNS1Q9H2V7 528 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 HINT3Q9NQE9 182 aaKnown RBP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 A0A1W2PPV4 95 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 M0R135 149 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 CAV3P56539 151 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 ANGPTL5Q86XS5 388 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 C1orf87Q8N0U7 546 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 ZNF799Q96GE5 643 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 ZC3HAV1LQ96H79 300 aaKnown RBP15.74■□□□□ 0.11
PHRF1-202ENST00000413872 CRLF2Q9HC73 371 aa15.74■□□□□ 0.11
PHRF1-202ENST00000413872 GSTP1P09211 210 aaKnown RBP15.73■□□□□ 0.11
PHRF1-202ENST00000413872 HNRNPFP52597 415 aaKnown RBP15.73■□□□□ 0.11
PHRF1-202ENST00000413872 KCNJ8Q15842 424 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 DHRS13Q6UX07 377 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 CCDC28AQ8IWP9 274 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 RDH10Q8IZV5 341 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 SECTM1Q8WVN6 248 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 NMNAT2Q9BZQ4 307 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 EMC7Q9NPA0 242 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 DEGS1O15121 323 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 PPM1DO15297 605 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 KLK10O43240 276 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 SULT1C4O75897 302 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 CTXN2P0C2S0 81 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 FGFBP1Q14512 234 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 ISYNA1Q9NPH2 558 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 TAS2R16Q9NYV7 291 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 LOC107986453A0A1B0GWG9 222 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 CALCBP10092 127 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 ISL1P61371 349 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 LTC4SQ16873 150 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 JMJD6Q6NYC1 403 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-202ENST00000413872 SMRP1Q8NCR6 262 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 ANKRD9Q96BM1 317 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-202ENST00000413872 NUDT9Q9BW91 350 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 PPP1R14DQ9NXH3 145 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 CTSFQ9UBX1 484 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 SERTM1A2A2V5 107 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 GRPP07492 148 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 NOXA1Q86UR1 476 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 PTOV1Q86YD1 416 aa15.73■□□□□ 0.11
PHRF1-202ENST00000413872 OR51D1Q8NGF3 324 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms