RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FADS6Q8N9I5 356 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ADPRHL1Q8NDY3 354 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 OR2M3Q8NG83 312 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ABHD4Q8TB40 342 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 SETD6Q8TBK2 473 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 SMAP2Q8WU79 429 aaPredicted RBP15.26■□□□□ 0.03
PTPRC-206ENST00000413409 SLC25A36Q96CQ1 311 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 KLHL15Q96M94 604 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 SDHCQ99643 169 aaPredicted RBP15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ATF6BQ99941 703 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 OR11A1Q9GZK7 315 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 SRRQ9GZT4 340 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 CXXC4Q9H2H0 198 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 FANCFQ9NPI8 374 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 DLL4Q9NR61 685 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ALKBH4Q9NXW9 302 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 ETAA1Q9NY74 926 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 MED11Q9P086 117 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 GNG8Q9UK08 70 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 TMEM14AQ9Y6G1 99 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 CSPG4Q6UVK1 2322 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 STAB1Q9NY15 2570 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 AKAP6Q13023 2319 aa15.26■□□□□ 0.03
PTPRC-206ENST00000413409 NBEAL1Q6ZS30 2694 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 TRAV1-2A0A0B4J238 106 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 A0A1W2PRG6 482 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 ACVR1BP36896 505 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 GLYR1Q49A26 553 aaPredicted RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 HBMQ6B0K9 141 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 METAP1DQ6UB28 335 aaPredicted RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 MEX3BQ6ZN04 569 aaKnown RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 NCCRP1Q6ZVX7 275 aaPredicted RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 FAM220AQ7Z4H9 259 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 FAM83FQ8NEG4 500 aaPredicted RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 GHSRQ92847 366 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 FRMD6Q96NE9 622 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 TTYH2Q9BSA4 534 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 REPIN1Q9BWE0 567 aaKnown RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 WDR76Q9H967 626 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 ACOXLQ9NUZ1 547 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 RPH3AQ9Y2J0 694 aaPredicted RBP15.25■□□□□ 0.03
PTPRC-206ENST00000413409 GRIP1Q9Y3R0 1128 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 HRH3Q9Y5N1 445 aa15.25■□□□□ 0.03
PTPRC-206ENST00000413409 A0A087WZY1 265 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 A0A1W2PNV4 684 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 ANKRD61A6NGH8 418 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 C11orf98E9PRG8 122 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 H7C1C5 153 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 ARHGEF9O43307 516 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 SLC19A2O60779 497 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 ARL6IP5O75915 188 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 TACSTD2P09758 323 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 EDNRAP25101 427 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 CASP3P42574 277 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 DAP3P51398 398 aaKnown RBP15.24■□□□□ 0.03
PTPRC-206ENST00000413409 BCAP31P51572 246 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 HCCSP53701 268 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 LCN6P62502 163 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 EGR3Q06889 387 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 PUDPQ08623 228 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 MFAP5Q13361 173 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 INSL4Q14641 139 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 ZNF79Q15937 498 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 BICRALQ6AI39 1079 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 LYPD4Q6UWN0 246 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 ARSKQ6UWY0 536 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 NDUFAF7Q7L592 441 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 CEACAM19Q7Z692 300 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 SLC22A16Q86VW1 577 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 OR6V1Q8N148 313 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 GDPD1Q8N9F7 314 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 ZNF511Q8NB15 262 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 SLC25A43Q8WUT9 341 aaPredicted RBP15.24■□□□□ 0.03
PTPRC-206ENST00000413409 NTNG2Q96CW9 530 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 TSSK2Q96PF2 358 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 INTS14Q96SY0 518 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 SYT4Q9H2B2 425 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 SERINC1Q9NRX5 453 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 TINAGQ9UJW2 476 aa15.24■□□□□ 0.03
PTPRC-206ENST00000413409 IGLV1-36A0A0B4J1U3 117 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 FUOMA2VDF0 154 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 ANKRD33BA6NCL7 494 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 DCTN6O00399 190 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 ITGA10O75578 1167 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 ABHD16AO95870 558 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 UCHL1P09936 223 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 FKBP2P26885 142 aaKnown RBP15.23■□□□□ 0.03
PTPRC-206ENST00000413409 ADH6P28332 368 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 PSMD7P51665 324 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 RIN1Q13671 783 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 ACSM3Q53FZ2 586 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 OR5M10Q6IEU7 315 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 C3orf33Q6P1S2 294 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 H1FNTQ75WM6 255 aaPredicted RBP15.23■□□□□ 0.03
PTPRC-206ENST00000413409 PM20D2Q8IYS1 436 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 POC5Q8NA72 575 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 OR11G2Q8NGC1 345 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 POC1BQ8TC44 478 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms