RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CYP2R1Q6VVX0 501 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 PTCHD4Q6ZW05 846 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 POM121L2Q96KW2 1035 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 ZNF570Q96NI8 536 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 GPX7Q96SL4 187 aaPredicted RBP16.35■□□□□ 0.21
SF3A1-202ENST00000411423 BPESC1Q9GZL8 116 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 RAB1BQ9H0U4 201 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 CDH20Q9HBT6 801 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 EMC7Q9NPA0 242 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 YAE1D1Q9NRH1 226 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 FAM53CQ9NYF3 392 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 SPEF1Q9Y4P9 236 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 RTTNQ86VV8 2226 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 VSTM5A8MXK1 200 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 B2RBV5 119 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 SYNGR3O43761 229 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 NDUFB2O95178 105 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 GADD45GO95257 159 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 FAM107AO95990 144 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 DAOP14920 347 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 CTLA4P16410 223 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 USF1P22415 310 aaPredicted RBP16.34■□□□□ 0.21
SF3A1-202ENST00000411423 PPP2R2BQ00005 443 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 GGTLC2Q14390 218 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 TBC1D28Q2M2D7 210 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 ZNF101Q8IZC7 436 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 GTF3AQ92664 365 aaKnown RBP16.34■□□□□ 0.21
SF3A1-202ENST00000411423 NSL1Q96IY1 281 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 SOX7Q9BT81 388 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 ZNF416Q9BWM5 594 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 OR2H1Q9GZK4 316 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 CCNB1IP1Q9NPC3 277 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 POLE4Q9NR33 117 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 GRHPRQ9UBQ7 328 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 REV1Q9UBZ9 1251 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 DUSP13Q9UII6 198 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 IER3IP1Q9Y5U9 82 aa16.34■□□□□ 0.21
SF3A1-202ENST00000411423 ABCA2Q9BZC7 2435 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 IQCMA0A1B0GVH7 501 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 LOC390937A0A1W2PQ73 354 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 TCRBV5S2A0A599 114 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 PRSS37A4D1T9 235 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 UNC119BA6NIH7 251 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 KIAA1324LA8MWY0 1029 aaPredicted RBP16.33■□□□□ 0.2
SF3A1-202ENST00000411423 CRLF1O75462 422 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 MPZL1O95297 269 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 FABP3P05413 133 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 CST2P09228 141 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 NAT2P11245 290 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 STOMP27105 288 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 SDHAP31040 664 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 RRM2P31350 389 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 CDKN2AP42771 156 aaKnown RBP16.33■□□□□ 0.2
SF3A1-202ENST00000411423 UCP2P55851 309 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 HSF2Q03933 536 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 KRR1Q13601 381 aaKnown RBP16.33■□□□□ 0.2
SF3A1-202ENST00000411423 ELFN2Q5R3F8 820 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 C6orf52Q5T4I8 152 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 RGS7BPQ6MZT1 257 aaPredicted RBP16.33■□□□□ 0.2
SF3A1-202ENST00000411423 ZNF774Q6NX45 483 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 FNDC8Q8TC99 324 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 NEU4Q8WWR8 484 aaPredicted RBP16.33■□□□□ 0.2
SF3A1-202ENST00000411423 PIMREGQ9BSJ6 248 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 C1orf198Q9H425 327 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 IL1RAPQ9NPH3 570 aa16.33■□□□□ 0.2
SF3A1-202ENST00000411423 IGLV3-9A0A075B6K5 115 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 M0R233 179 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 NDUFS8O00217 210 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 SOCS2O14508 198 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 NCR1O76036 304 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 GPANK1O95872 356 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 HPXP02790 462 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 TP53P04637 393 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-202ENST00000411423 NR2C1P13056 603 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 ZNF250P15622 560 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 ZNF16P17020 682 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-202ENST00000411423 ITGA2P17301 1181 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 CCNOP22674 350 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 APLNRP35414 380 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 RPS23P62266 143 aaKnown RBP16.32■□□□□ 0.2
SF3A1-202ENST00000411423 MS4A2Q01362 244 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 PLP2Q04941 152 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 ZDHHC21Q8IVQ6 265 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 SYT4Q9H2B2 425 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 MYOZ1Q9NP98 299 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-202ENST00000411423 AURKCQ9UQB9 309 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 SVEP1Q4LDE5 3571 aa16.32■□□□□ 0.2
SF3A1-202ENST00000411423 SONP18583 2426 aaKnown RBP16.31■□□□□ 0.2
SF3A1-202ENST00000411423 C5orf49A4QMS7 147 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 DCTN6O00399 190 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 TLX2O43763 284 aaPredicted RBP16.31■□□□□ 0.2
SF3A1-202ENST00000411423 PPP1R3DO95685 299 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 TXNDC12O95881 172 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 PTHP01270 115 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 LCKP06239 509 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 MSR1P21757 451 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 COL8A2P25067 703 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 GIFP27352 417 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 IL2RGP31785 369 aa16.31■□□□□ 0.2
SF3A1-202ENST00000411423 RIN1Q13671 783 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms