RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 TEX30Q5JUR7 227 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 C6orf141Q5SZD1 244 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 BHLHA15Q7RTS1 189 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-201ENST00000404210 P2RY8Q86VZ1 359 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 C17orf78Q8N4C9 275 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 STEAP2Q8NFT2 490 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 C11orf40Q8WZ69 217 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 KISS1RQ969F8 398 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-201ENST00000404210 CNBD2Q96M20 576 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 KCNN2Q9H2S1 579 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 PLCXD1Q9NUJ7 323 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 MRPS18AQ9NVS2 196 aaKnown RBP10.8□□□□□ -0.68
LINC00339-201ENST00000404210 MRPL22Q9NWU5 206 aaKnown RBP10.8□□□□□ -0.68
LINC00339-201ENST00000404210 GALNT8Q9NY28 637 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 KCNG2Q9UJ96 466 aa10.8□□□□□ -0.68
LINC00339-201ENST00000404210 CLEC18AA5D8T8 446 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 NKX2-6A6NCS4 301 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF593O00488 134 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-201ENST00000404210 TMCC2O75069 709 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 RAD51DO75771 328 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 AGFG2O95081 481 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 MPZL1O95297 269 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 GPANK1O95872 356 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 CST2P09228 141 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 MSR1P21757 451 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 IL32P24001 234 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 SRSF1Q07955 248 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC00339-201ENST00000404210 DBPQ10586 325 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-201ENST00000404210 POU4F2Q12837 409 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 PCK2Q16822 640 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 TBRG1Q3YBR2 411 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 KLHL22Q53GT1 634 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 LAIR2Q6ISS4 152 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 KRT80Q6KB66 452 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 KLHL24Q6TFL4 600 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 CLEC18BQ6UXF7 455 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 SHFQ7M4L6 423 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 DPPA2Q7Z7J5 298 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 SYT9Q86SS6 491 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 SKA3Q8IX90 412 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 TIGD4Q8IY51 512 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 CLEC18CQ8NCF0 446 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 OR10H5Q8NGA6 315 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 ZMYND19Q96E35 227 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-201ENST00000404210 FOXN4Q96NZ1 517 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 OBP2BQ9NPH6 170 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 SLC17A5Q9NRA2 495 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 EXOGQ9Y2C4 368 aaKnown RBP10.79□□□□□ -0.68
LINC00339-201ENST00000404210 HCFC1P51610 2035 aa10.79□□□□□ -0.68
LINC00339-201ENST00000404210 KALRNO60229 2985 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 A0A096LPE4 126 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 A0A1W2PPZ6 126 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 C12orf71A8MTZ7 269 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SBK2P0C263 348 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 B4GALT1P15291 398 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 PPP3CBP16298 524 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 UGT2B10P36537 528 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 MTNR1AP48039 350 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 ENTPD1P49961 510 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 PCBD1P61457 104 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 TFF3Q07654 80 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
LINC00339-201ENST00000404210 TSC22D1Q15714 1073 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SMN1Q16637 294 aaKnown RBP10.78□□□□□ -0.68
LINC00339-201ENST00000404210 MEP1BQ16820 701 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SLC36A2Q495M3 483 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 TIMM23BQ5SRD1 257 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 UGT2A3Q6UWM9 527 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 B3GLCTQ6Y288 498 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SSX8Q7RTT4 187 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SLC16A14Q7RTX9 510 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 LRRC18Q8N456 261 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 WDR31Q8NA23 367 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 HSD17B8Q92506 261 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SH3GL3Q99963 347 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF416Q9BWM5 594 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 CDADC1Q9BWV3 514 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 YTHDF1Q9BYJ9 559 aaKnown RBP10.78□□□□□ -0.68
LINC00339-201ENST00000404210 YIPF3Q9GZM5 350 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 WDR76Q9H967 626 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 AMBNQ9NP70 447 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 UBAP1Q9NZ09 502 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 AMDHD2Q9Y303 409 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 PCDHGB1Q9Y5G3 927 aa10.78□□□□□ -0.68
LINC00339-201ENST00000404210 SMG1Q96Q15 3661 aaKnown RBP10.78□□□□□ -0.68
LINC00339-201ENST00000404210 IRGMA1A4Y4 181 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 OR5H1A6NKK0 313 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 SEC14L2O76054 403 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 WNT11O96014 354 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 CCDC159P0C7I6 412 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 DBTP11182 482 aaKnown RBP10.77□□□□□ -0.69
LINC00339-201ENST00000404210 HOXC12P31275 282 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms