RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TAAR1Q96RJ0 339 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 ECSITQ9BQ95 431 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MRPL37Q9BZE1 423 aaKnown RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 CLSTN2Q9H4D0 955 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 AGPAT4Q9NRZ5 378 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 STOX2Q9P2F5 926 aaPredicted RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 PLEKHG2Q9H7P9 1386 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 TRBV11-1A0A0K0K1C0 115 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 PES1O00541 588 aaKnown RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 XKRYO14609 159 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 SRP72O76094 671 aaKnown RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 ERCC1P07992 297 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 RALBP11234 206 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 PRPS2P11908 318 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 HOXA9P31269 272 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 CASQ1P31415 396 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 MAGEA1P43355 309 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 TNNT2P45379 298 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 RPS5P46782 204 aaKnown RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 RAB10P61026 200 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 IRF8Q02556 426 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 CLINT1Q14677 625 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 WDR43Q15061 677 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 COA6Q5JTJ3 125 aaKnown RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR52W1Q6IF63 320 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 TMEM53Q6P2H8 277 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 LYPD2Q6UXB3 125 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 C12orf54Q6X4T0 127 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 TMEM179Q6ZVK1 233 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 C6orf120Q7Z4R8 191 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 IQCKQ8N0W5 287 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 BPIFCQ8NFQ6 507 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR52K1Q8NGK4 314 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 NUBPLQ8TB37 319 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 MARCH1Q8TCQ1 289 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 GIMAP1Q8WWP7 306 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZNF285Q96NJ3 590 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 COL21A1Q96P44 957 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 TSSK3Q96PN8 268 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 SLC7A5P2Q9GIP4 190 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 FANCEQ9HB96 536 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 CCNB1IP1Q9NPC3 277 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 HRASLS2Q9NWW9 162 aa2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 PDP1Q9P0J1 537 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 UXTQ9UBK9 157 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 CHTOPQ9Y3Y2 248 aaKnown RBP2.52□□□□□ -2.01
HMGB1P17-201ENST00000403495 CENPJQ9HC77 1338 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 FAM25EA8MYX2 175 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 SIRPB1O00241 398 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 NUPL2O15504 423 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 EIF4E2O60573 245 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 PLEKP08567 350 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 SLC1A2P43004 574 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 NAMPTP43490 491 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 CSNK1EP49674 416 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 UBE2MP61081 183 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 HMGCS1Q01581 520 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 MAB21L1Q13394 359 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 RCAN2Q14206 197 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 GGTLC2Q14390 218 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZNF726P1Q15940 193 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 POU2AF1Q16633 256 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 CCNJQ5T5M9 372 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 LYPD6BQ8NI32 183 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 TSEN15Q8WW01 171 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 EEF1AKMT3Q96AZ1 226 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 WFIKKN1Q96NZ8 548 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 TGS1Q96RS0 853 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 SH3GL3Q99963 347 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 BCL7BQ9BQE9 202 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 IQCGQ9H095 443 aaKnown RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 GPATCH2LQ9NWQ4 482 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 AHSPQ9NZD4 102 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZNF629Q9UEG4 869 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 SHPKQ9UHJ6 478 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 PSG8Q9UQ74 426 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 CDC42BPBQ9Y5S2 1711 aa2.51□□□□□ -2.01
HMGB1P17-201ENST00000403495 NKX2-6A6NCS4 301 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ERICH4A6NGS2 130 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 SUPT3HB4E1H0 165 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ANKRD63C9JTQ0 380 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 H0YHG0 523 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 SLC9A3R1O14745 358 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 AIREO43918 545 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 HUS1O60921 280 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 MYL2P10916 166 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 EIF2S2P20042 333 aaKnown RBP2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 TUBG1P23258 451 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 STOMP27105 288 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR1E1P30953 314 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 GPX4P36969 197 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 CEACAM6P40199 344 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 CDKN2BP42772 138 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 OR1G1P47890 313 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 CX3CR1P49238 355 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 UBE2AP49459 152 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ZNF138P52744 262 aa2.5□□□□□ -2.01
HMGB1P17-201ENST00000403495 ADARB1P78563 741 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms