RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KCTD8Q6ZWB6 473 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 SHFQ7M4L6 423 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 ZBTB46Q86UZ6 589 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 WDFY1Q8IWB7 410 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 ZIC4Q8N9L1 334 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 POMGNT2Q8NAT1 580 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 OR4F15Q8NGB8 312 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 OR6N1Q8NGY5 312 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 OR2M2Q96R28 347 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 TRIB1Q96RU8 372 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 CNN2Q99439 309 aaKnown RBP11.7□□□□□ -0.54
SEC13-209ENST00000397117 FGF20Q9NP95 211 aaPredicted RBP11.7□□□□□ -0.54
SEC13-209ENST00000397117 DIMT1Q9UNQ2 313 aaKnown RBP11.7□□□□□ -0.54
SEC13-209ENST00000397117 RCE1Q9Y256 329 aa11.7□□□□□ -0.54
SEC13-209ENST00000397117 EXOGQ9Y2C4 368 aaKnown RBP11.7□□□□□ -0.54
SEC13-209ENST00000397117 ALPK2Q86TB3 2170 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 AHRRA9YTQ3 701 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 SLC43A1O75387 559 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 KHDRBS3O75525 346 aaKnown RBP11.69□□□□□ -0.54
SEC13-209ENST00000397117 CTAG2O75638 210 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 SELENOPP49908 381 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 MVKQ03426 396 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 GLO1Q04760 184 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 FMODQ06828 376 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 ZNF585AQ6P3V2 769 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 OR10H4Q8NGA5 316 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 ZNRF4Q8WWF5 429 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 INTS12Q96CB8 462 aaKnown RBP11.69□□□□□ -0.54
SEC13-209ENST00000397117 CDCA4Q9BXL8 241 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 FAM192AQ9GZU8 254 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 RACGAP1Q9H0H5 632 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 DLL4Q9NR61 685 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 ERGIC3Q9Y282 383 aa11.69□□□□□ -0.54
SEC13-209ENST00000397117 NOSIPQ9Y314 301 aaKnown RBP11.69□□□□□ -0.54
SEC13-209ENST00000397117 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
SEC13-209ENST00000397117 HRNRQ86YZ3 2850 aaPredicted RBP11.69□□□□□ -0.54
SEC13-209ENST00000397117 IGLV1-36A0A0B4J1U3 117 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ZNF724A8MTY0 619 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 MRPL33O75394 65 aaKnown RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 TGM6O95932 706 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 YES1P07947 543 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 QDPRP09417 244 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 SBK2P0C263 348 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 PAX7P23759 505 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 MAP2K4P45985 399 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ACTC1P68032 377 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ACTA1P68133 377 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 EMX1Q04741 257 aaPredicted RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 NEDD8Q15843 81 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 LINC01590Q5TEZ4 76 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 B3GNT6Q6ZMB0 384 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 TUSC5Q8IXB3 177 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 TMEM123Q8N131 208 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 NSMAFQ92636 917 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 TMEM45BQ96B21 275 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 SIGLEC11Q96RL6 698 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 TTYH2Q9BSA4 534 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 LIME1Q9H400 295 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 GSX1Q9H4S2 264 aaPredicted RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 RNF122Q9H9V4 155 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 CALHM2Q9HA72 323 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 BCO1Q9HAY6 547 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ADGRL4Q9HBW9 690 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 B3GAT2Q9NPZ5 323 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 GLTPQ9NZD2 209 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ST6GALNAC2Q9UJ37 374 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 KIAA1549Q9HCM3 1950 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 MYL12BO14950 172 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ZNF432O94892 652 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 GLI4P10075 376 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 NAA10P41227 235 aaPredicted RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 HIST3H3Q16695 136 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 RTL6Q6ICC9 239 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 SATL1Q86VE3 508 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ERI1Q8IV48 349 aaKnown RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 LIX1LQ8IVB5 337 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 GLB1L2Q8IW92 636 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 C20orf196Q8IYI0 205 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ACBD7Q8N6N7 88 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 TMEM54Q969K7 222 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 GP6Q9HCN6 339 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 GLRX2Q9NS18 164 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 CLCF1Q9UBD9 225 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 ING1Q9UK53 422 aaPredicted RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 CLEC4AQ9UMR7 237 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 COA3Q9Y2R0 106 aaPredicted RBP11.68□□□□□ -0.54
SEC13-209ENST00000397117 FAM215AQ9Y5M1 114 aa11.68□□□□□ -0.54
SEC13-209ENST00000397117 A0A0G2JNJ9 132 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 DAPL1A0PJW8 107 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 TVP23AA6NH52 213 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 C12orf71A8MTZ7 269 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms