RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 C20orf96Q9NUD7 363 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 GPATCH2LQ9NWQ4 482 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 IFNKQ9P0W0 207 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 STOX2Q9P2F5 926 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 VSIG4Q9Y279 399 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 CFL2Q9Y281 166 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 ASF1AQ9Y294 204 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 TTC21AQ8NDW8 1320 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 RLFQ13129 1914 aa3.58□□□□□ -1.84
HMGB1P10-201ENST00000395823 RAB19A4D1S5 217 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TNFSF11O14788 317 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 BCKDKO14874 412 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 PPP1R2P9O14990 202 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 SOX15O60248 233 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 RBBP9O75884 186 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 ERLIN2O94905 339 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 RPP14O95059 124 aaKnown RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 CCNB2O95067 398 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 KRT7P08729 469 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 CCNB1P14635 433 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TCN1P20061 433 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 SLC2A5P22732 501 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TUBG1P23258 451 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 DCKP27707 260 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 PCK1P35558 622 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 KCNJ3P48549 501 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 CEBPGP53567 150 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 KRTAP10-9P60411 292 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 IRF8Q02556 426 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 STX5Q13190 355 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 ITIH4Q14624 930 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 PON2Q15165 354 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 SOHLH1Q5JUK2 328 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 EOGTQ5NDL2 527 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 CASC10Q5T4H9 136 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 C9orf135Q5VTT2 229 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TWF2Q6IBS0 349 aaKnown RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 C22orf42Q6IC83 251 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 FAM173BQ6P4H8 233 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 SLC16A14Q7RTX9 510 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 RALGPS2Q86X27 583 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TGIF2LYQ8IUE0 185 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF100Q8IYN0 542 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 C14orf178Q8N769 122 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 HSD17B11Q8NBQ5 300 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR4A4PQ8NGN8 299 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR2G2Q8NGZ5 317 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 SPATA3Q8NHX4 192 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZNF707Q96C28 371 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 CCDC126Q96EE4 140 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 C16orf74Q96GX8 76 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 USP47Q96K76 1375 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 FCRL1Q96LA6 429 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TEKT3Q9BXF9 490 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TM6SF2Q9BZW4 377 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 POLR2J2Q9GZM3 115 aaKnown RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 ROGDIQ9GZN7 287 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 DRC3Q9H069 523 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 POLR2J3Q9H1A7 115 aaKnown RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 DEFB127Q9H1M4 99 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 OR51V1Q9H2C8 321 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 CSNK1G1Q9HCP0 422 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 MRPS30Q9NP92 439 aaKnown RBP3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 TUBG2Q9NRH3 451 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 AHSPQ9NZD4 102 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 MTCH1Q9NZJ7 389 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 PPIL1Q9Y3C6 166 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 NEUROG3Q9Y4Z2 214 aa3.57□□□□□ -1.84
HMGB1P10-201ENST00000395823 THSD7BQ9C0I4 1608 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 FANCIQ9NVI1 1328 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 A0A0A6YYH2 397 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 IGKV1D-13A0A0B4J2D9 117 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 SMCO2A6NFE2 343 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 A6NJ64 397 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 SMIM23A6NLE4 172 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 RAD51BO15315 384 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 IGKV1-13P0DP09 117 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 FOLR1P15328 257 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 CMA1P23946 247 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 STOMP27105 288 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 HOXA9P31269 272 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 FMO3P31513 532 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 CBX5P45973 191 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 GPR6P46095 362 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 MNAT1P51948 309 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 TAS2R19P59542 299 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 PRPS1P60891 318 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 PSMC5P62195 406 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 ART3Q13508 389 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 CYTH1Q15438 398 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 DNAL1Q4LDG9 190 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 TMEM31Q5JXX7 168 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 REEP3Q6NUK4 255 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 NDUFAF7Q7L592 441 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 AKAP14Q86UN6 197 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 GABRG1Q8N1C3 465 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 ZADH2Q8N4Q0 377 aa3.56□□□□□ -1.84
HMGB1P10-201ENST00000395823 TMEM104Q8NE00 496 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms